CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0001918901
(
Trichobilharzia regenti
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TRE_0001918901
T337216_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0001918901-mRNA-1
Sox
28
78
EKRLKAAYQAFEERMMPQLKAENPSMRHSQLKQLIFKMFQTSPENPKNQQN
Links
Other
Sox
family TFs
Other
Trichobilharzia regenti
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sjc_0011880
Schistosoma japonicum
Sjc_0011880
N
0.723
Smp_004360
Schistosoma mansoni
Smp_004360
N
0.722
A_06553
Schistosoma haematobium
A_06553
N
0.722
SMRZ_0002114501
Schistosoma margrebowiei
SMRZ_0002114501
N
0.716
NV13812
Nasonia vitripennis
NV13812
I
0.580
ECPE_0001800901
Echinostoma caproni
ECPE_0001800901
N
0.577
DILT_0001250601
Diphyllobothrium latum
DILT_0001250601
N
0.577
KGM_20190
Danaus plexippus
KGM_20190
I
0.562
ALUE_0001851001
Ascaris lumbricoides
ALUE_0001851001
N
0.561
ASU_10445
Ascaris suum
ASU_10445
N
0.561
NEMVEDRAFT_v1g201358
Nematostella vectensis
NEMVEDRAFT_v1g201358
I
0.561
PEQ_0000413701
Parascaris equorum
PEQ_0000413701
N
0.561
MCINX012524
Melitaea cinxia
MCINX012524
I
0.555
CapteG224864
Capitella teleta
CapteG224864
I
0.555
HHAL005242-PA
Halyomorpha halys
HHAL005242-PA
I
0.551
HelroG66455
Helobdella robusta
HelroG66455
N
0.549
Ocbimv22013575m.g
Octopus bimaculoides
Ocbimv22013575m.g
I
0.548
T265_00523
Opisthorchis viverrini
T265_00523
N
0.543
GB50764
Apis mellifera
GB50764
I
0.539
ISCW011313
Ixodes scapularis
ISCW011313
N
0.538
SINV12391
Solenopsis invicta
SINV12391
I
0.532
Hsal_04778--XP_394373.1_APIME
Harpegnathos saltator
Hsal_04778--XP_394373.1_APIME
I
0.532
ACEP12759
Atta cephalotes
ACEP12759
I
0.532
SMU15012775
Schmidtea mediterranea
SMU15012775
N
0.527
MDOA001488
Musca domestica
MDOA001488
I
0.526
ACAC_0000409101
Angiostrongylus cantonensis
ACAC_0000409101
N
0.526
tetur18g00680
Tetranychus urticae
tetur18g00680
I
0.526
ANCCEY_08672
Ancylostoma ceylanicum
ANCCEY_08672
N
0.526
ACOC_0001323101
Angiostrongylus costaricensis
ACOC_0001323101
N
0.526
DICVIV_03175
Dictyocaulus viviparus
DICVIV_03175
N
0.526
ANCCAN_29654
Ancylostoma caninum
ANCCAN_29654
N
0.526
NBR_0000605501
Nippostrongylus brasiliensis
NBR_0000605501
N
0.523
HPLM_0000348901
Haemonchus placei
HPLM_0000348901
N
0.523
TELCIR_11967
Teladorsagia circumcincta
TELCIR_11967
N
0.523
HPBE_0001252601
Heligmosomoides bakeri
HPBE_0001252601
N
0.523
HCOI00594600
Haemonchus contortus
HCOI00594600
N
0.523
Y73E7A.1
Caenorhabditis elegans
WBGene00022268
N
0.521
ACYPI003297
Acyrthosiphon pisum
ACYPI003297
I
0.518
BGIBMGA013514
Bombyx mori
BGIBMGA013514
N
0.517
HMEL009197
Heliconius melpomene
HMEL009197
N
0.517
OESDEN_05486
Oesophagostomum dentatum
OESDEN_05486
N
0.515
CJA05209
Caenorhabditis japonica
CJA05209
N
0.515
CRE03905
Caenorhabditis remanei
CRE03905
N
0.515
CBN09380
Caenorhabditis brenneri
CBN09380
N
0.515
NECAME_12352
Necator americanus
NECAME_12352
N
0.515
CLEC002888
Cimex lectularius
CLEC002888
N
0.514
EmuJ_000938500
Echinococcus multilocularis
EmuJ_000938500
N
0.513
TASK_0000467701
Taenia asiatica
TASK_0000467701
N
0.513
TsM_000545400
Taenia solium
TsM_000545400
N
0.513
EmuJ_000916900
Echinococcus multilocularis
EmuJ_000916900
N
0.513
SBAD_0000307901
Soboliphyme baturini
SBAD_0000307901
N
0.511
Cflo_06133--XP_394373.1_APIME
Camponotus floridanus
Cflo_06133--XP_394373.1_APIME
I
0.510
DAPPUDRAFT_303074
Daphnia pulex
DAPPUDRAFT_303074
N
0.504
PHUM036320
Pediculus humanus
PHUM036320
N
0.499
GPUH_0000676401
Gongylonema pulchrum
GPUH_0000676401
N
0.496
Minc12734
Meloidogyne incognita
Minc12734
N
0.496
GH18160
Drosophila grimshawi
FBgn0125628
I
0.496
GE25578
Drosophila yakuba
FBgn0242642
I
0.496
GK13574
Drosophila willistoni
FBgn0215582
I
0.496
maker-nMf.1.1.scaf18285-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf18285-snap-gene-0.4
N
0.496
MhA1_Contig1250.frz3.gene10
Meloidogyne hapla
MhA1_Contig1250.frz3.gene10
N
0.496
TCLT_0001081001
Thelazia callipaeda
TCLT_0001081001
N
0.496
CpipJ_CPIJ005084
Culex pipiens
CpipJ_CPIJ005084
N
0.492
CPIJ005084
Culex quinquefasciatus
CPIJ005084
N
0.492
SPU_001776
Strongylocentrotus purpuratus
SPU_001776
N
0.492
RPRC009760
Rhodnius prolixus
RPRC009760
N
0.485
LCUP006380
Lucilia cuprina
LCUP006380
N
0.481
estExt_fgenesh2_pg.C_1070085
Branchiostoma floridae
estExt_fgenesh2_pg.C_1070085
N
0.480
estExt_fgenesh2_pm.C_3240002
Branchiostoma floridae
estExt_fgenesh2_pm.C_3240002
N
0.480
HDID_0000279401
Hymenolepis diminuta
HDID_0000279401
N
0.480
AQUA009805
Anopheles quadriannulatus
AQUA009805
N
0.478
AMEM002948
Anopheles merus
AMEM002948
N
0.478
ASTEI04275
Anopheles stephensi
ASTEI04275
N
0.478
AGAP004110
Anopheles gambiae
AGAP004110
N
0.478
ASIS023527
Anopheles sinensis
ASIS023527
N
0.478
ACUA003510
Anopheles culicifacies
ACUA003510
N
0.478
ACOM033320
Anopheles coluzzii
ACOM033320
N
0.478
ACHR002403
Anopheles christyi
ACHR002403
N
0.478
AEPI008570
Anopheles epiroticus
AEPI008570
N
0.478
AARA009694
Anopheles arabiensis
AARA009694
N
0.478
XP_002163918.1
Hydra magnipapillata
XP_002163918.1
I
0.473
AMEC005071
Anopheles melas
AMEC005071
N
0.472
maker-pve_contig_105-snap-gene-0.29
Pythium vexans
maker-pve_contig_105-snap-gene-0.29
N
0.472
maker-piw_contig_1911-snap-gene-0.6
Pythium iwayamai
maker-piw_contig_1911-snap-gene-0.6
N
0.466
SPRG_06372
Saprolegnia parasitica
SPRG_06372
N
0.466
maker-pir_contig_430-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_430-fgenesh-gene-0.3
N
0.466
PYU1_G003004
Pythium ultimum
PYU1_G003004
N
0.466
D917_07703
Trichinella nativa
D917_07703
N
0.460
EFV51436
Trichinella spiralis
EFV51436
N
0.460
TC004658
Tribolium castaneum
TC004658
N
0.456
fgenesh1_pg.C_scaffold_73784000001
Phytophthora capsici
fgenesh1_pg.C_scaffold_73784000001
N
0.455
estExt_fgenesh1_kg.C_80399
Phytophthora capsici
estExt_fgenesh1_kg.C_80399
N
0.455
Physo132366
Phytophthora sojae
Physo132366
N
0.455
HNAJ_0000101901
Hymenolepis nana
HNAJ_0000101901
N
0.455
GLOINDRAFT_342259
Rhizophagus irregularis
GLOINDRAFT_342259
I
0.455
fgenesh_scip_prom.46568.2049
Phytophthora kernoviae
fgenesh_scip_prom.46568.2049
N
0.455
F443_19335
Phytophthora parasitica
F443_19335
N
0.455
ALNC14_126360
Albugo laibachii
ALNC14_126360
N
0.453
LotgiG126557
Lottia gigantea
LotgiG126557
N
0.452
CGI_10019404
Crassostrea gigas
CGI_10019404
N
0.448
AALB007196
Anopheles albimanus
AALB007196
N
0.446
ADAC009894
Anopheles darlingi
ADAC009894
N
0.446
ADIR002941
Anopheles dirus
ADIR002941
N
0.446
AFUN011346
Anopheles funestus
AFUN011346
N
0.446
AMAG_02504
Allomyces macrogynus
AMAG_02504
I
0.446
AFAF018499
Anopheles farauti
AFAF018499
N
0.446
AMIN003838
Anopheles minimus
AMIN003838
N
0.446
AATE006267
Anopheles atroparvus
AATE006267
N
0.446
fgenesh_scip_prom.28083.7036
Phytophthora lateralis
fgenesh_scip_prom.28083.7036
N
0.430
Phyra74523
Phytophthora ramorum
Phyra74523
N
0.430
GLOINDRAFT_347422
Rhizophagus irregularis
GLOINDRAFT_347422
I
0.425
Cla010239
Citrullus lanatus
Cla010239
I
0.425
ccdc124
Oryzias latipes
ENSORLG00000015728
N
0.424
CAOG_02676
Capsaspora owczarzaki
CAOG_02676
N
0.420