CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc12734
(
Meloidogyne incognita
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Minc12734
T335286_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc12734
Sox
501
545
EKRLKAAYATFEENRLPRLKEEHPTLRLSQLKQLLKKEWQKSADN
Links
Other
Sox
family TFs
Other
Meloidogyne incognita
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig1250.frz3.gene10
Meloidogyne hapla
MhA1_Contig1250.frz3.gene10
N
0.741
maker-nMf.1.1.scaf18285-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf18285-snap-gene-0.4
N
0.741
ASU_10445
Ascaris suum
ASU_10445
N
0.676
PEQ_0000413701
Parascaris equorum
PEQ_0000413701
N
0.676
ALUE_0001851001
Ascaris lumbricoides
ALUE_0001851001
N
0.676
ACAC_0000409101
Angiostrongylus cantonensis
ACAC_0000409101
N
0.670
ACOC_0001323101
Angiostrongylus costaricensis
ACOC_0001323101
N
0.670
ANCCEY_08672
Ancylostoma ceylanicum
ANCCEY_08672
N
0.670
ANCCAN_29654
Ancylostoma caninum
ANCCAN_29654
N
0.670
DICVIV_03175
Dictyocaulus viviparus
DICVIV_03175
N
0.670
HPBE_0001252601
Heligmosomoides bakeri
HPBE_0001252601
N
0.667
TELCIR_11967
Teladorsagia circumcincta
TELCIR_11967
N
0.667
NBR_0000605501
Nippostrongylus brasiliensis
NBR_0000605501
N
0.667
HPLM_0000348901
Haemonchus placei
HPLM_0000348901
N
0.667
HCOI00594600
Haemonchus contortus
HCOI00594600
N
0.667
Y73E7A.1
Caenorhabditis elegans
WBGene00022268
N
0.665
CBN09380
Caenorhabditis brenneri
CBN09380
N
0.659
NECAME_12352
Necator americanus
NECAME_12352
N
0.659
OESDEN_05486
Oesophagostomum dentatum
OESDEN_05486
N
0.659
CJA05209
Caenorhabditis japonica
CJA05209
N
0.659
CRE03905
Caenorhabditis remanei
CRE03905
N
0.659
Cflo_06133--XP_394373.1_APIME
Camponotus floridanus
Cflo_06133--XP_394373.1_APIME
I
0.643
GPUH_0000676401
Gongylonema pulchrum
GPUH_0000676401
N
0.637
TCLT_0001081001
Thelazia callipaeda
TCLT_0001081001
N
0.637
Ocbimv22013575m.g
Octopus bimaculoides
Ocbimv22013575m.g
I
0.635
KGM_20190
Danaus plexippus
KGM_20190
I
0.635
NEMVEDRAFT_v1g201358
Nematostella vectensis
NEMVEDRAFT_v1g201358
I
0.635
HelroG66455
Helobdella robusta
HelroG66455
N
0.635
MCINX012524
Melitaea cinxia
MCINX012524
I
0.628
CapteG224864
Capitella teleta
CapteG224864
I
0.628
NV13812
Nasonia vitripennis
NV13812
I
0.624
HHAL005242-PA
Halyomorpha halys
HHAL005242-PA
I
0.624
CPIJ005084
Culex quinquefasciatus
CPIJ005084
N
0.623
CpipJ_CPIJ005084
Culex pipiens
CpipJ_CPIJ005084
N
0.623
GB50764
Apis mellifera
GB50764
I
0.620
Hsal_04778--XP_394373.1_APIME
Harpegnathos saltator
Hsal_04778--XP_394373.1_APIME
I
0.620
SINV12391
Solenopsis invicta
SINV12391
I
0.620
ACEP12759
Atta cephalotes
ACEP12759
I
0.613
GE25578
Drosophila yakuba
FBgn0242642
I
0.606
GH18160
Drosophila grimshawi
FBgn0125628
I
0.606
GK13574
Drosophila willistoni
FBgn0215582
I
0.606
tetur18g00680
Tetranychus urticae
tetur18g00680
I
0.605
MDOA001488
Musca domestica
MDOA001488
I
0.599
RPRC009760
Rhodnius prolixus
RPRC009760
N
0.597
BGIBMGA013514
Bombyx mori
BGIBMGA013514
N
0.596
HMEL009197
Heliconius melpomene
HMEL009197
N
0.590
estExt_fgenesh2_pg.C_1070085
Branchiostoma floridae
estExt_fgenesh2_pg.C_1070085
N
0.589
estExt_fgenesh2_pm.C_3240002
Branchiostoma floridae
estExt_fgenesh2_pm.C_3240002
N
0.589
ISCW011313
Ixodes scapularis
ISCW011313
N
0.582
DAPPUDRAFT_303074
Daphnia pulex
DAPPUDRAFT_303074
N
0.578
AMIN003838
Anopheles minimus
AMIN003838
N
0.577
AFUN011346
Anopheles funestus
AFUN011346
N
0.577
AFAF018499
Anopheles farauti
AFAF018499
N
0.577
PHUM036320
Pediculus humanus
PHUM036320
N
0.572
maker-pir_contig_430-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_430-fgenesh-gene-0.3
N
0.571
PYU1_G003004
Pythium ultimum
PYU1_G003004
N
0.571
SPRG_06372
Saprolegnia parasitica
SPRG_06372
N
0.571
maker-piw_contig_1911-snap-gene-0.6
Pythium iwayamai
maker-piw_contig_1911-snap-gene-0.6
N
0.571
estExt_fgenesh1_kg.C_80399
Phytophthora capsici
estExt_fgenesh1_kg.C_80399
N
0.560
fgenesh1_pg.C_scaffold_73784000001
Phytophthora capsici
fgenesh1_pg.C_scaffold_73784000001
N
0.560
fgenesh_scip_prom.46568.2049
Phytophthora kernoviae
fgenesh_scip_prom.46568.2049
N
0.560
Physo132366
Phytophthora sojae
Physo132366
N
0.560
F443_19335
Phytophthora parasitica
F443_19335
N
0.560
LotgiG126557
Lottia gigantea
LotgiG126557
N
0.555
SBAD_0000307901
Soboliphyme baturini
SBAD_0000307901
N
0.553
CGI_10019404
Crassostrea gigas
CGI_10019404
N
0.551
ACYPI003297
Acyrthosiphon pisum
ACYPI003297
I
0.546
AMEC005071
Anopheles melas
AMEC005071
N
0.545
ADAC009894
Anopheles darlingi
ADAC009894
N
0.545
ASTEI04275
Anopheles stephensi
ASTEI04275
N
0.545
AGAP004110
Anopheles gambiae
AGAP004110
N
0.545
AEPI008570
Anopheles epiroticus
AEPI008570
N
0.545
ASIS023527
Anopheles sinensis
ASIS023527
N
0.545
AQUA009805
Anopheles quadriannulatus
AQUA009805
N
0.545
AMEM002948
Anopheles merus
AMEM002948
N
0.545
ADIR002941
Anopheles dirus
ADIR002941
N
0.545
AARA009694
Anopheles arabiensis
AARA009694
N
0.545
AALB007196
Anopheles albimanus
AALB007196
N
0.545
ACHR002403
Anopheles christyi
ACHR002403
N
0.545
AATE006267
Anopheles atroparvus
AATE006267
N
0.545
ACUA003510
Anopheles culicifacies
ACUA003510
N
0.545
ACOM033320
Anopheles coluzzii
ACOM033320
N
0.545
fgenesh_scip_prom.28083.7036
Phytophthora lateralis
fgenesh_scip_prom.28083.7036
N
0.535
Phyra74523
Phytophthora ramorum
Phyra74523
N
0.535
AMAM021723
Anopheles maculatus
AMAM021723
N
0.532
CLEC002888
Cimex lectularius
CLEC002888
N
0.529
maker-pve_contig_105-snap-gene-0.29
Pythium vexans
maker-pve_contig_105-snap-gene-0.29
N
0.527
SPU_001776
Strongylocentrotus purpuratus
SPU_001776
N
0.521
ALNC14_126360
Albugo laibachii
ALNC14_126360
N
0.514
D918_07944
Trichuris suis
D918_07944
N
0.509
ccdc124
Oryzias latipes
ENSORLG00000015728
N
0.504
LCUP006380
Lucilia cuprina
LCUP006380
N
0.503
CLEC000086
Cimex lectularius
CLEC000086
N
0.501
TRE_0001918901
Trichobilharzia regenti
TRE_0001918901
N
0.496
AAEL008417
Aedes aegypti
AAEL008417
N
0.495
TC004658
Tribolium castaneum
TC004658
N
0.494
Sjc_0011880
Schistosoma japonicum
Sjc_0011880
N
0.483
CMU_009510
Cryptosporidium muris
CMU_009510
N
0.481
Smp_004360
Schistosoma mansoni
Smp_004360
N
0.476
SMRZ_0002114501
Schistosoma margrebowiei
SMRZ_0002114501
N
0.476
A_06553
Schistosoma haematobium
A_06553
N
0.476
EFV51436
Trichinella spiralis
EFV51436
N
0.472
D917_07703
Trichinella nativa
D917_07703
N
0.472
DILT_0001250601
Diphyllobothrium latum
DILT_0001250601
N
0.463
TTRE_0000309701
Trichuris trichiura
TTRE_0000309701
N
0.463
ML11467a
Mnemiopsis leidyi
ML11467a
N
0.460
GUITHDRAFT_162866
Guillardia theta
GUITHDRAFT_162866
N
0.451
ENSCING00000023833
Ciona intestinalis
ENSCING00000023833
N
0.438
fgeneshCV_pg.C_scaffold_2000022
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_2000022
N
0.430
fgenesh1_pm.2_#_13
Coccomyxa subellipsoidea C169
fgenesh1_pm.2_#_13
N
0.430
ETH_00032160
Eimeria tenella
ETH_00032160
N
0.421
TGME49_037260
Toxoplasma gondii
TGME49_037260
N
0.421