CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A_06553
(
Schistosoma haematobium
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
A_06553
T335910_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
A_06553
Sox
161
216
EKRLKAAYQAFEERLMPQLKAENPNMRHSQLKQLIFKMFQTSPENPKNQHNSCYNS
Links
Other
Sox
family TFs
Other
Schistosoma haematobium
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_004360
Schistosoma mansoni
Smp_004360
N
0.741
SMRZ_0002114501
Schistosoma margrebowiei
SMRZ_0002114501
N
0.735
Sjc_0011880
Schistosoma japonicum
Sjc_0011880
N
0.728
TRE_0001918901
Trichobilharzia regenti
TRE_0001918901
N
0.722
ECPE_0001800901
Echinostoma caproni
ECPE_0001800901
N
0.570
NV13812
Nasonia vitripennis
NV13812
I
0.560
DILT_0001250601
Diphyllobothrium latum
DILT_0001250601
N
0.558
T265_00523
Opisthorchis viverrini
T265_00523
N
0.550
KGM_20190
Danaus plexippus
KGM_20190
I
0.542
ALUE_0001851001
Ascaris lumbricoides
ALUE_0001851001
N
0.541
NEMVEDRAFT_v1g201358
Nematostella vectensis
NEMVEDRAFT_v1g201358
I
0.541
ASU_10445
Ascaris suum
ASU_10445
N
0.541
PEQ_0000413701
Parascaris equorum
PEQ_0000413701
N
0.541
CapteG224864
Capitella teleta
CapteG224864
I
0.536
MCINX012524
Melitaea cinxia
MCINX012524
I
0.536
SMU15012775
Schmidtea mediterranea
SMU15012775
N
0.534
HHAL005242-PA
Halyomorpha halys
HHAL005242-PA
I
0.531
HelroG66455
Helobdella robusta
HelroG66455
N
0.529
Ocbimv22013575m.g
Octopus bimaculoides
Ocbimv22013575m.g
I
0.528
TASK_0000467701
Taenia asiatica
TASK_0000467701
N
0.520
EmuJ_000938500
Echinococcus multilocularis
EmuJ_000938500
N
0.520
TsM_000545400
Taenia solium
TsM_000545400
N
0.520
EmuJ_000916900
Echinococcus multilocularis
EmuJ_000916900
N
0.520
GB50764
Apis mellifera
GB50764
I
0.520
ISCW011313
Ixodes scapularis
ISCW011313
N
0.519
Hsal_04778--XP_394373.1_APIME
Harpegnathos saltator
Hsal_04778--XP_394373.1_APIME
I
0.513
SINV12391
Solenopsis invicta
SINV12391
I
0.513
ACEP12759
Atta cephalotes
ACEP12759
I
0.513
MDOA001488
Musca domestica
MDOA001488
I
0.507
DICVIV_03175
Dictyocaulus viviparus
DICVIV_03175
N
0.506
tetur18g00680
Tetranychus urticae
tetur18g00680
I
0.506
ANCCEY_08672
Ancylostoma ceylanicum
ANCCEY_08672
N
0.506
ACOC_0001323101
Angiostrongylus costaricensis
ACOC_0001323101
N
0.506
ACAC_0000409101
Angiostrongylus cantonensis
ACAC_0000409101
N
0.506
ANCCAN_29654
Ancylostoma caninum
ANCCAN_29654
N
0.506
TELCIR_11967
Teladorsagia circumcincta
TELCIR_11967
N
0.504
HPLM_0000348901
Haemonchus placei
HPLM_0000348901
N
0.504
HCOI00594600
Haemonchus contortus
HCOI00594600
N
0.504
NBR_0000605501
Nippostrongylus brasiliensis
NBR_0000605501
N
0.504
HPBE_0001252601
Heligmosomoides bakeri
HPBE_0001252601
N
0.504
Y73E7A.1
Caenorhabditis elegans
WBGene00022268
N
0.502
SPU_001776
Strongylocentrotus purpuratus
SPU_001776
N
0.499
ACYPI003297
Acyrthosiphon pisum
ACYPI003297
I
0.498
HMEL009197
Heliconius melpomene
HMEL009197
N
0.497
BGIBMGA013514
Bombyx mori
BGIBMGA013514
N
0.497
CJA05209
Caenorhabditis japonica
CJA05209
N
0.496
CBN09380
Caenorhabditis brenneri
CBN09380
N
0.496
CRE03905
Caenorhabditis remanei
CRE03905
N
0.496
NECAME_12352
Necator americanus
NECAME_12352
N
0.495
OESDEN_05486
Oesophagostomum dentatum
OESDEN_05486
N
0.495
CLEC002888
Cimex lectularius
CLEC002888
N
0.494
SBAD_0000307901
Soboliphyme baturini
SBAD_0000307901
N
0.491
Cflo_06133--XP_394373.1_APIME
Camponotus floridanus
Cflo_06133--XP_394373.1_APIME
I
0.491
HDID_0000279401
Hymenolepis diminuta
HDID_0000279401
N
0.487
DAPPUDRAFT_303074
Daphnia pulex
DAPPUDRAFT_303074
N
0.485
PHUM036320
Pediculus humanus
PHUM036320
N
0.479
GH18160
Drosophila grimshawi
FBgn0125628
I
0.477
GK13574
Drosophila willistoni
FBgn0215582
I
0.477
GE25578
Drosophila yakuba
FBgn0242642
I
0.477
Minc12734
Meloidogyne incognita
Minc12734
N
0.476
MhA1_Contig1250.frz3.gene10
Meloidogyne hapla
MhA1_Contig1250.frz3.gene10
N
0.476
maker-nMf.1.1.scaf18285-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf18285-snap-gene-0.4
N
0.476
GPUH_0000676401
Gongylonema pulchrum
GPUH_0000676401
N
0.476
TCLT_0001081001
Thelazia callipaeda
TCLT_0001081001
N
0.476
CPIJ005084
Culex quinquefasciatus
CPIJ005084
N
0.473
CpipJ_CPIJ005084
Culex pipiens
CpipJ_CPIJ005084
N
0.473
RPRC009760
Rhodnius prolixus
RPRC009760
N
0.465
LCUP006380
Lucilia cuprina
LCUP006380
N
0.462
HNAJ_0000101901
Hymenolepis nana
HNAJ_0000101901
N
0.462
estExt_fgenesh2_pg.C_1070085
Branchiostoma floridae
estExt_fgenesh2_pg.C_1070085
N
0.460
estExt_fgenesh2_pm.C_3240002
Branchiostoma floridae
estExt_fgenesh2_pm.C_3240002
N
0.460
ACOM033320
Anopheles coluzzii
ACOM033320
N
0.459
ACHR002403
Anopheles christyi
ACHR002403
N
0.459
AARA009694
Anopheles arabiensis
AARA009694
N
0.459
AMEM002948
Anopheles merus
AMEM002948
N
0.459
ACUA003510
Anopheles culicifacies
ACUA003510
N
0.459
AEPI008570
Anopheles epiroticus
AEPI008570
N
0.459
AGAP004110
Anopheles gambiae
AGAP004110
N
0.459
AQUA009805
Anopheles quadriannulatus
AQUA009805
N
0.459
ASIS023527
Anopheles sinensis
ASIS023527
N
0.459
ASTEI04275
Anopheles stephensi
ASTEI04275
N
0.459
XP_002163918.1
Hydra magnipapillata
XP_002163918.1
I
0.453
AMEC005071
Anopheles melas
AMEC005071
N
0.452
maker-pve_contig_105-snap-gene-0.29
Pythium vexans
maker-pve_contig_105-snap-gene-0.29
N
0.452
maker-pir_contig_430-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_430-fgenesh-gene-0.3
N
0.446
ALNC14_126360
Albugo laibachii
ALNC14_126360
N
0.446
SPRG_06372
Saprolegnia parasitica
SPRG_06372
N
0.446
maker-piw_contig_1911-snap-gene-0.6
Pythium iwayamai
maker-piw_contig_1911-snap-gene-0.6
N
0.446
PYU1_G003004
Pythium ultimum
PYU1_G003004
N
0.446
EFV51436
Trichinella spiralis
EFV51436
N
0.440
D917_07703
Trichinella nativa
D917_07703
N
0.440
TC004658
Tribolium castaneum
TC004658
N
0.437
estExt_fgenesh1_kg.C_80399
Phytophthora capsici
estExt_fgenesh1_kg.C_80399
N
0.436
fgenesh_scip_prom.46568.2049
Phytophthora kernoviae
fgenesh_scip_prom.46568.2049
N
0.436
fgenesh1_pg.C_scaffold_73784000001
Phytophthora capsici
fgenesh1_pg.C_scaffold_73784000001
N
0.436
Physo132366
Phytophthora sojae
Physo132366
N
0.436
F443_19335
Phytophthora parasitica
F443_19335
N
0.436
GLOINDRAFT_342259
Rhizophagus irregularis
GLOINDRAFT_342259
I
0.435
LotgiG126557
Lottia gigantea
LotgiG126557
N
0.433
CGI_10019404
Crassostrea gigas
CGI_10019404
N
0.429
ADAC009894
Anopheles darlingi
ADAC009894
N
0.427
AMAG_02504
Allomyces macrogynus
AMAG_02504
I
0.427
AFAF018499
Anopheles farauti
AFAF018499
N
0.427
AFUN011346
Anopheles funestus
AFUN011346
N
0.427
ADIR002941
Anopheles dirus
ADIR002941
N
0.427
AATE006267
Anopheles atroparvus
AATE006267
N
0.427
AALB007196
Anopheles albimanus
AALB007196
N
0.427
AMIN003838
Anopheles minimus
AMIN003838
N
0.427