Bra031900 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra031900 T352344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY51
M02568_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7478 		0.871 0.914
PK25870.1
M01325_2.00 		Cannabis sativa
NRGTCAAM
KTTGACYN		 PBM
Lambert et al.(2019)
pTH10156 		0.854 0.810
WRKY50
M07424_2.00 		Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN		 Dap-seq
OMalley et al.(2016)
WRKY50_col_a 		0.820 0.707
WRKY50
M07425_2.00 		Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN		 Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a 		0.820 0.707
ZAP1
M00982_2.00 		Arabidopsis thaliana
NRGTCAAN
NTTGACYN		 PBM
Lindemose et al.(2014)
WRKY1 		0.809 0.586
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra031900.1-P WRKY 108 165

Links

Other WRKY family TFs
Other Brassica rapa TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g166420 Brassica oleracea Bo2g166420 I 0.880
Thhalv10004930m.g Eutrema salsugineum Thhalv10004930m.g I 0.877
Bra037796 Brassica rapa Bra037796 I 0.874
Bo9g018440 Brassica oleracea Bo9g018440 I 0.874
WRKY51 Arabidopsis lyrata fgenesh2_kg.8__2513__AT5G64810.1 I 0.871
Bo3g100860 Brassica oleracea Bo3g100860 I 0.871
WRKY51 Arabidopsis thaliana AT5G64810 D 0.871
Carubv10027178m.g Capsella rubella Carubv10027178m.g I 0.869
Bra024328 Brassica rapa Bra024328 I 0.869
Cagra.2438s0022 Capsella grandiflora Cagra.2438s0022 I 0.869
Bostr.0568s0314 Boechera stricta Bostr.0568s0314 I 0.865
GLYMA05G31800 Glycine max GLYMA05G31800 I 0.861
MTR_8g092010 Medicago truncatula MTR_8g092010 I 0.858
Gorai.007G245200 Gossypium raimondii Gorai.007G245200 I 0.858
Cucsa.250350 Cucumis sativus Cucsa.250350 I 0.857
chr1.CM0032.340.nd Lotus japonicus chr1.CM0032.340.nd I 0.856
VIT_07s0031g01710 Vitis vinifera VIT_07s0031g01710 I 0.856
Eucgr.I00316 Eucalyptus grandis Eucgr.I00316 I 0.855
cassava14063.valid.m1 Manihot esculenta cassava14063.valid.m1 I 0.855
cassava14062.valid.m1 Manihot esculenta cassava14062.valid.m1 I 0.855
PK25870.1 Cannabis sativa PK25870.1 D 0.854
MDP0000253189 Malus domestica MDP0000253189 I 0.854
PRUPE_ppa015480mg Prunus persica PRUPE_ppa015480mg I 0.854
Gorai.003G047800 Gossypium raimondii Gorai.003G047800 I 0.854
GLYMA08G15050 Glycine max GLYMA08G15050 I 0.853
SapurV1A.0594s0120 Salix purpurea SapurV1A.0594s0120 I 0.853
TCM_001265 Theobroma cacao TCM_001265 I 0.852
POPTR_0007s06720 Populus trichocarpa POPTR_0007s06720 I 0.852
Solyc04g051690.2 Solanum lycopersicum Solyc04g051690.2 I 0.851
Pavir.Eb02766 Panicum virgatum Pavir.Eb02766 I 0.851
Eucgr.I00317 Eucalyptus grandis Eucgr.I00317 I 0.851
POPTR_0005s08720 Populus trichocarpa POPTR_0005s08720 I 0.850
GLYMA04G39650 Glycine max GLYMA04G39650 I 0.850
TRIUR3_33662 Triticum urartu TRIUR3_33662 I 0.849
Traes_3DL_DF0D3F3FE Triticum aestivum Traes_3DL_DF0D3F3FE I 0.849
TRAES3BF111700140CFD_g Triticum aestivum TRAES3BF111700140CFD_g I 0.849
Ca_04141 Cicer arietinum Ca_04141 I 0.848
Ciclev10026733m.g Citrus clementina Ciclev10026733m.g I 0.848
orange1.1g029257m.g Citrus sinensis orange1.1g029257m.g I 0.848
Cucsa.101530 Cucumis sativus Cucsa.101530 I 0.847
Pavir.Ea02619 Panicum virgatum Pavir.Ea02619 I 0.847
Si004464m.g Setaria italica Si004464m.g I 0.847
BRADI2G48090 Brachypodium distachyon BRADI2G48090 I 0.847
Sb03g032800 Sorghum bicolor Sb03g032800 I 0.846
GRMZM2G101405 Zea mays GRMZM2G101405 I 0.846
Traes_1DL_D550418641 Triticum aestivum Traes_1DL_D550418641 I 0.846
OGLUM01G32750 Oryza glumaepatula OGLUM01G32750 I 0.845
OBART01G28780 Oryza barthii OBART01G28780 I 0.845
MLOC_81131 Hordeum vulgare MLOC_81131 I 0.845
MLOC_10264 Hordeum vulgare MLOC_10264 I 0.845
Aquca_014_00461 Aquilegia coerulea Aquca_014_00461 I 0.845
OBART01G28750 Oryza barthii OBART01G28750 I 0.845
BGIOSGA000921 Oryza indica BGIOSGA000921 I 0.845
OMERI01G26280 Oryza meridionalis OMERI01G26280 I 0.845
OPUNC01G28510 Oryza punctata OPUNC01G28510 I 0.845
ORGLA01G0238400 Oryza glaberrima ORGLA01G0238400 I 0.845
ORUFI01G31840 Oryza rufipogon ORUFI01G31840 I 0.845
OS01G0714800 Oryza sativa OS01G0714800 I 0.845
PDK_20s1331611g001 Phoenix dactylifera PDK_20s1331611g001 I 0.845
Pm001825 Prunus mume Pm001825 I 0.844
TRIUR3_01979 Triticum urartu TRIUR3_01979 I 0.844
PDK_20s1512971g002 Phoenix dactylifera PDK_20s1512971g002 I 0.844
F775_52480 Aegilops tauschii F775_52480 I 0.844
Lus10006848.g Linum usitatissimum Lus10006848.g I 0.844
GRMZM5G863420 Zea mays GRMZM5G863420 I 0.844
GSMUA_Achr3G20450_001 Musa acuminata GSMUA_Achr3G20450_001 I 0.844
GRMZM2G137802 Zea mays GRMZM2G137802 I 0.843
LPERR01G24650 Leersia perrieri LPERR01G24650 I 0.843
BRADI2G18530 Brachypodium distachyon BRADI2G18530 I 0.842
Sb09g026830 Sorghum bicolor Sb09g026830 I 0.842
Si023194m.g Setaria italica Si023194m.g I 0.842
OB05G31630 Oryza brachyantha OB05G31630 I 0.842
TCM_035897 Theobroma cacao TCM_035897 I 0.842
OPUNC05G21470 Oryza punctata OPUNC05G21470 I 0.842
ONIVA05G24830 Oryza nivara ONIVA05G24830 I 0.842
OMERI01G26720 Oryza meridionalis OMERI01G26720 I 0.842
ORUFI05G25660 Oryza rufipogon ORUFI05G25660 I 0.842
OBART05G24090 Oryza barthii OBART05G24090 I 0.842
OS05G0537100 Oryza sativa OS05G0537100 I 0.842
BGIOSGA020266 Oryza indica BGIOSGA020266 I 0.842
LPERR05G19900 Leersia perrieri LPERR05G19900 I 0.842
Pavir.Ca01747 Panicum virgatum Pavir.Ca01747 I 0.842
GSMUA_Achr7G09680_001 Musa acuminata GSMUA_Achr7G09680_001 I 0.842
AMTR_s00078p00145410 Amborella trichopoda AMTR_s00078p00145410 I 0.842
Pavir.J03284 Panicum virgatum Pavir.J03284 I 0.842
MTR_3g095040 Medicago truncatula MTR_3g095040 I 0.842
SapurV1A.1151s0090 Salix purpurea SapurV1A.1151s0090 I 0.841
evm.TU.supercontig_919.2 Carica papaya evm.TU.supercontig_919.2 I 0.841
Lus10035841.g Linum usitatissimum Lus10035841.g I 0.840
SapurV1A.0318s0110 Salix purpurea SapurV1A.0318s0110 I 0.840
PGSC0003DMG401031196 Solanum tuberosum PGSC0003DMG401031196 I 0.840
Lus10036624.g Linum usitatissimum Lus10036624.g I 0.840
LPERR05G04920 Leersia perrieri LPERR05G04920 I 0.839
GRMZM2G057116 Zea mays GRMZM2G057116 I 0.839
Pavir.J05732 Panicum virgatum Pavir.J05732 I 0.839
Si023279m.g Setaria italica Si023279m.g I 0.839
Pavir.Ca01028 Panicum virgatum Pavir.Ca01028 I 0.839
Sb09g005700 Sorghum bicolor Sb09g005700 I 0.839
29771.m000072 Ricinus communis 29771.m000072 I 0.839
Traes_1AL_9ADA7A031 Triticum aestivum Traes_1AL_9ADA7A031 I 0.838
Solyc08g062490.2 Solanum lycopersicum Solyc08g062490.2 I 0.838
Cla022318 Citrullus lanatus Cla022318 I 0.837
GLYMA06G15220 Glycine max GLYMA06G15220 I 0.837
OPUNC05G05190 Oryza punctata OPUNC05G05190 I 0.836
Gorai.001G021500 Gossypium raimondii Gorai.001G021500 I 0.836
ORGLA05G0050000 Oryza glaberrima ORGLA05G0050000 I 0.836
BGIOSGA018676 Oryza indica BGIOSGA018676 I 0.836
TCM_037343 Theobroma cacao TCM_037343 I 0.836
TRAES3BF267200010CFD_g Triticum aestivum TRAES3BF267200010CFD_g I 0.836
Traes_1AS_1432A2F79 Triticum aestivum Traes_1AS_1432A2F79 I 0.836
OB05G15280 Oryza brachyantha OB05G15280 I 0.836
MLOC_12079 Hordeum vulgare MLOC_12079 I 0.836
VIT_04s0008g01470 Vitis vinifera VIT_04s0008g01470 I 0.836
OMERI05G05240 Oryza meridionalis OMERI05G05240 I 0.836
ORUFI05G05890 Oryza rufipogon ORUFI05G05890 I 0.836
OS05G0183100 Oryza sativa OS05G0183100 I 0.836
OBART05G05560 Oryza barthii OBART05G05560 I 0.836
OGLUM05G05440 Oryza glumaepatula OGLUM05G05440 I 0.836
POPTR_0006s24050 Populus trichocarpa POPTR_0006s24050 I 0.836
TRIUR3_29978 Triticum urartu TRIUR3_29978 I 0.836
ONIVA05G06030 Oryza nivara ONIVA05G06030 I 0.836
F775_44085 Aegilops tauschii F775_44085 I 0.835
Sb03g003360 Sorghum bicolor Sb03g003360 I 0.835
GRMZM2G163054 Zea mays GRMZM2G163054 I 0.835
Gorai.010G131300 Gossypium raimondii Gorai.010G131300 I 0.835
LPERR01G05270 Leersia perrieri LPERR01G05270 I 0.835
PK29640.1 Cannabis sativa PK29640.1 I 0.834
Solyc04g072070.2 Solanum lycopersicum Solyc04g072070.2 I 0.834
PDK_20s1384091g002 Phoenix dactylifera PDK_20s1384091g002 I 0.834
F775_19446 Aegilops tauschii F775_19446 I 0.834
PGSC0003DMG400033177 Solanum tuberosum PGSC0003DMG400033177 I 0.833
Pm005548 Prunus mume Pm005548 I 0.833
BRADI2G33540 Brachypodium distachyon BRADI2G33540 I 0.833
BRADI2G05510 Brachypodium distachyon BRADI2G05510 I 0.833
Eucgr.C00675 Eucalyptus grandis Eucgr.C00675 I 0.833
GLYMA04G05700 Glycine max GLYMA04G05700 I 0.833
BGIOSGA002237 Oryza indica BGIOSGA002237 I 0.832
mgf026356m Mimulus guttatus mgf026356m I 0.832
Gorai.011G114200 Gossypium raimondii Gorai.011G114200 I 0.832
Pavir.Ea00274 Panicum virgatum Pavir.Ea00274 I 0.832
Pavir.J08526 Panicum virgatum Pavir.J08526 I 0.832
cassava28704.m1 Manihot esculenta cassava28704.m1 I 0.832
Si002621m.g Setaria italica Si002621m.g I 0.832
GRMZM2G516301 Zea mays GRMZM2G516301 I 0.832
OMERI01G05840 Oryza meridionalis OMERI01G05840 I 0.832
ORUFI01G06050 Oryza rufipogon ORUFI01G06050 I 0.832
OPUNC01G05450 Oryza punctata OPUNC01G05450 I 0.832
ONIVA01G06360 Oryza nivara ONIVA01G06360 I 0.832
OGLUM01G06090 Oryza glumaepatula OGLUM01G06090 I 0.832
MTR_1g015140 Medicago truncatula MTR_1g015140 I 0.832
OS01G0186000 Oryza sativa OS01G0186000 I 0.832
GRMZM2G475984 Zea mays GRMZM2G475984 I 0.832
ORGLA01G0052400 Oryza glaberrima ORGLA01G0052400 I 0.832
PGSC0003DMG400023196 Solanum tuberosum PGSC0003DMG400023196 I 0.831
OB01G37710 Oryza brachyantha OB01G37710 I 0.831
Sb03g026170 Sorghum bicolor Sb03g026170 I 0.831
VIT_04s0069g00980 Vitis vinifera VIT_04s0069g00980 I 0.831
Bo9g011080 Brassica oleracea Bo9g011080 I 0.830
cassava10657.m1 Manihot esculenta cassava10657.m1 I 0.830
29739.m003586 Ricinus communis 29739.m003586 I 0.830
28644.m000915 Ricinus communis 28644.m000915 I 0.830
MTR_3g104750 Medicago truncatula MTR_3g104750 I 0.830
gene22024-v1.0-hybrid Fragaria vesca gene22024-v1.0-hybrid I 0.830
Gorai.010G098000 Gossypium raimondii Gorai.010G098000 I 0.830
Bra009885 Brassica rapa Bra009885 I 0.830
orange1.1g031482m.g Citrus sinensis orange1.1g031482m.g I 0.829
F775_27801 Aegilops tauschii F775_27801 I 0.829
Ciclev10009761m.g Citrus clementina Ciclev10009761m.g I 0.829
PGSC0003DMG400031140 Solanum tuberosum PGSC0003DMG400031140 I 0.829
Solyc12g056750.1 Solanum lycopersicum Solyc12g056750.1 I 0.829
LjSGA_012799.2 Lotus japonicus LjSGA_012799.2 I 0.828
TRAES3BF066700160CFD_g Triticum aestivum TRAES3BF066700160CFD_g I 0.828
VIT_04s0069g00970 Vitis vinifera VIT_04s0069g00970 I 0.827
evm.TU.supercontig_126.49 Carica papaya evm.TU.supercontig_126.49 I 0.827
Gorai.009G259600 Gossypium raimondii Gorai.009G259600 I 0.827
GSMUA_Achr8G26240_001 Musa acuminata GSMUA_Achr8G26240_001 I 0.827
OMERI01G18980 Oryza meridionalis OMERI01G18980 I 0.826
Carubv10002099m.g Capsella rubella Carubv10002099m.g I 0.826
ORUFI01G23500 Oryza rufipogon ORUFI01G23500 I 0.826
OLONG_016272 Oryza longistaminata OLONG_016272 I 0.826
LPERR01G17790 Leersia perrieri LPERR01G17790 I 0.826
OBART01G20830 Oryza barthii OBART01G20830 I 0.826
Cagra.0998s0013 Capsella grandiflora Cagra.0998s0013 I 0.826
GLYMA06G05721 Glycine max GLYMA06G05721 I 0.826
ONIVA01G23410 Oryza nivara ONIVA01G23410 I 0.826
BGIOSGA003851 Oryza indica BGIOSGA003851 I 0.826
OPUNC01G20950 Oryza punctata OPUNC01G20950 I 0.826
OGLUM01G24490 Oryza glumaepatula OGLUM01G24490 I 0.826
MDP0000480547 Malus domestica MDP0000480547 I 0.826
OS01G0584900 Oryza sativa OS01G0584900 I 0.826
Bo7g095430 Brassica oleracea Bo7g095430 I 0.825
Bostr.29827s0201 Boechera stricta Bostr.29827s0201 I 0.825
Ca_09134 Cicer arietinum Ca_09134 I 0.825
GLYMA17G34210 Glycine max GLYMA17G34210 I 0.824
Si002862m.g Setaria italica Si002862m.g I 0.824
GSMUA_Achr7G23980_001 Musa acuminata GSMUA_Achr7G23980_001 I 0.823
MDP0000121669 Malus domestica MDP0000121669 I 0.823
PDK_20s1746561g001 Phoenix dactylifera PDK_20s1746561g001 I 0.822
Thhalv10005029m.g Eutrema salsugineum Thhalv10005029m.g I 0.821
Bra020546 Brassica rapa Bra020546 I 0.821
Pavir.Eb02454 Panicum virgatum Pavir.Eb02454 I 0.821
Bo2g155960 Brassica oleracea Bo2g155960 I 0.821
WRKY50 Arabidopsis thaliana AT5G26170 D 0.820
Pavir.Ea02041 Panicum virgatum Pavir.Ea02041 I 0.820
TRIUR3_24021 Triticum urartu TRIUR3_24021 I 0.818
chr4.CM0333.60.nd Lotus japonicus chr4.CM0333.60.nd I 0.817
Ca_03825 Cicer arietinum Ca_03825 I 0.816
WRKY50 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6002222 I 0.814
GLYMA14G11440 Glycine max GLYMA14G11440 I 0.814
GSMUA_Achr7G15060_001 Musa acuminata GSMUA_Achr7G15060_001 I 0.813
Si005025m.g Setaria italica Si005025m.g I 0.813
Gorai.012G104800 Gossypium raimondii Gorai.012G104800 I 0.813
GSMUA_AchrUn_randomG18710_001 Musa acuminata GSMUA_AchrUn_randomG18710_001 I 0.813
GLYMA08G01430 Glycine max GLYMA08G01430 I 0.813
BGIOSGA000506 Oryza indica BGIOSGA000506 I 0.813
OPUNC01G35780 Oryza punctata OPUNC01G35780 I 0.813
TCM_014419 Theobroma cacao TCM_014419 I 0.813
OGLUM01G40860 Oryza glumaepatula OGLUM01G40860 I 0.813
Sb03g047350 Sorghum bicolor Sb03g047350 I 0.813
OB01G45670 Oryza brachyantha OB01G45670 I 0.813
GSMUA_Achr10G00810_001 Musa acuminata GSMUA_Achr10G00810_001 I 0.813
chr1.CM0147.890.nc Lotus japonicus chr1.CM0147.890.nc I 0.812
LPERR01G31730 Leersia perrieri LPERR01G31730 I 0.812
Eucgr.K03115 Eucalyptus grandis Eucgr.K03115 I 0.812
mgf023486m Mimulus guttatus mgf023486m I 0.812
chr1.CM0133.390.nc Lotus japonicus chr1.CM0133.390.nc I 0.812
Sb03g039550 Sorghum bicolor Sb03g039550 I 0.811
PGSC0003DMG400007788 Solanum tuberosum PGSC0003DMG400007788 I 0.811
GSMUA_Achr8G02180_001 Musa acuminata GSMUA_Achr8G02180_001 I 0.811
GLYMA07G16040 Glycine max GLYMA07G16040 I 0.811
PRUPE_ppa019550mg Prunus persica PRUPE_ppa019550mg I 0.811
GLYMA18G39970 Glycine max GLYMA18G39970 I 0.811
AC165171.2_FG002 Zea mays AC165171.2_FG002 I 0.811
TCM_021911 Theobroma cacao TCM_021911 I 0.811
WRKY49 Vitis vinifera VIT_08s0007g00570 I 0.811
Ciclev10013616m.g Citrus clementina Ciclev10013616m.g I 0.811
Pm002679 Prunus mume Pm002679 I 0.811
Cla018477 Citrullus lanatus Cla018477 I 0.811
MTR_7g062220 Medicago truncatula MTR_7g062220 I 0.811
gene18438-v1.0-hybrid Fragaria vesca gene18438-v1.0-hybrid I 0.811
Cucsa.066300 Cucumis sativus Cucsa.066300 I 0.811
SELMODRAFT_18136 Selaginella moellendorffii SELMODRAFT_18136 I 0.810
Pavir.Ea04136 Panicum virgatum Pavir.Ea04136 I 0.810
SELMODRAFT_29247 Selaginella moellendorffii SELMODRAFT_29247 I 0.810
GSMUA_Achr2G16390_001 Musa acuminata GSMUA_Achr2G16390_001 I 0.810
MDP0000205962 Malus domestica MDP0000205962 I 0.810
MDP0000255768 Malus domestica MDP0000255768 I 0.810
WRKY49 Arabidopsis thaliana AT5G43290 I 0.809
Cagra.0062s0038 Capsella grandiflora Cagra.0062s0038 I 0.809
Bostr.5022s0044 Boechera stricta Bostr.5022s0044 I 0.809
WRKY10 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1004208 I 0.809
mgf019359m Mimulus guttatus mgf019359m I 0.809
e_gw1.159.68.1 Physcomitrella patens e_gw1.159.68.1 I 0.809
orange1.1g038951m.g Citrus sinensis orange1.1g038951m.g I 0.809
Carubv10022129m.g Capsella rubella Carubv10022129m.g I 0.809
PK10734.1 Cannabis sativa PK10734.1 I 0.808
Bra027768 Brassica rapa Bra027768 I 0.808
fgenesh2_kg.97__1__AT5G43290.1 Arabidopsis lyrata fgenesh2_kg.97__1__AT5G43290.1 I 0.808
Al_scaffold_0008_672 Arabidopsis lyrata Al_scaffold_0008_672 I 0.808
Bostr.3148s0146 Boechera stricta Bostr.3148s0146 I 0.808
ORUFI01G49010 Oryza rufipogon ORUFI01G49010 I 0.808
ORGLA01G0392700 Oryza glaberrima ORGLA01G0392700 I 0.808
OPUNC01G44450 Oryza punctata OPUNC01G44450 I 0.808
Bo9g033920 Brassica oleracea Bo9g033920 I 0.808
OS01G0972800 Oryza sativa OS01G0972800 I 0.808
scaffold_800733.1 Arabidopsis lyrata scaffold_800733.1 I 0.808
scaffold_9700001.1 Arabidopsis lyrata scaffold_9700001.1 I 0.808
ONIVA01G51790 Oryza nivara ONIVA01G51790 I 0.808
Bo9g030630 Brassica oleracea Bo9g030630 I 0.808
Cagra.9063s0001 Capsella grandiflora Cagra.9063s0001 I 0.808
Carubv10026841m.g Capsella rubella Carubv10026841m.g I 0.808
BGIOSGA005267 Oryza indica BGIOSGA005267 I 0.808
OBART01G45510 Oryza barthii OBART01G45510 I 0.808
gw1.5.658.1 Physcomitrella patens gw1.5.658.1 I 0.808
OMERI01G42290 Oryza meridionalis OMERI01G42290 I 0.808
OGLUM01G49890 Oryza glumaepatula OGLUM01G49890 I 0.808
Bra027675 Brassica rapa Bra027675 I 0.808