Bo4g130860 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo4g130860 T000815_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.761 0.860
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.761 0.860
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.761 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g130860.1 AP2 191 242

Links

Other AP2 family TFs
Other Brassica oleracea TFs

421 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28206.m000104 Ricinus communis 28206.m000104 I 0.765
29904.m002941 Ricinus communis 29904.m002941 I 0.788
29908.m006005 Ricinus communis 29908.m006005 I 0.761
AMTR_s00009p00268560 Amborella trichopoda AMTR_s00009p00268560 I 0.761
AMTR_s00010p00194910 Amborella trichopoda AMTR_s00010p00194910 I 0.761
AMTR_s00089p00102760 Amborella trichopoda AMTR_s00089p00102760 I 0.774
AMTR_s00107p00095070 Amborella trichopoda AMTR_s00107p00095070 I
Aquca_014_00591 Aquilegia coerulea Aquca_014_00591 I 0.765
Aquca_014_00592 Aquilegia coerulea Aquca_014_00592 I 0.761
Aquca_034_00155 Aquilegia coerulea Aquca_034_00155 I 0.767
RAP2-13 Arabidopsis thaliana AT1G22190 I 0.761
ERF055 Arabidopsis thaliana AT1G36060 D 0.761
RAP2-4 Arabidopsis thaliana AT1G78080 D 0.761
ERF054 Arabidopsis thaliana AT4G28140 D
ERF060 Arabidopsis thaliana AT4G39780 I 0.768
AT5G65130 Arabidopsis thaliana AT5G65130 D
BGIOSGA011298 Oryza indica BGIOSGA011298 I 0.769
BGIOSGA028650 Oryza indica BGIOSGA028650 I 0.759
BGIOSGA030624 Oryza indica BGIOSGA030624 I 0.761
Bo00790s010 Brassica oleracea Bo00790s010 I 0.746
Bo04101s010 Brassica oleracea Bo04101s010 I 0.761
Bo1g002840 Brassica oleracea Bo1g002840 I 0.768
Bo1g051230 Brassica oleracea Bo1g051230 I
Bo3g100470 Brassica oleracea Bo3g100470 I
Bo3g152610 Brassica oleracea Bo3g152610 I 0.752
Bo5g037400 Brassica oleracea Bo5g037400 I 0.761
Bo5g069450 Brassica oleracea Bo5g069450 I 0.761
Bo6g081850 Brassica oleracea Bo6g081850 I 0.774
Bo6g121730 Brassica oleracea Bo6g121730 I 0.761
Bo7g111910 Brassica oleracea Bo7g111910 I
Bo7g119000 Brassica oleracea Bo7g119000 I 0.768
Bo8g054130 Brassica oleracea Bo8g054130 I
Bostr.0568s0279 Boechera stricta Bostr.0568s0279 I 0.686
Bostr.12659s0070 Boechera stricta Bostr.12659s0070 I 0.761
Bostr.20129s0241 Boechera stricta Bostr.20129s0241 I 0.761
Bostr.20910s0012 Boechera stricta Bostr.20910s0012 I 0.761
Bostr.25542s0167 Boechera stricta Bostr.25542s0167 I 0.768
Bostr.5022s0013 Boechera stricta Bostr.5022s0013 I 0.740
Bostr.7867s0648 Boechera stricta Bostr.7867s0648 I
Bostr.7903s0066 Boechera stricta Bostr.7903s0066 I 0.756
Bra003659 Brassica rapa Bra003659 I 0.774
Bra008343 Brassica rapa Bra008343 I 0.761
Bra010383 Brassica rapa Bra010383 I
Bra011833 Brassica rapa Bra011833 I 0.767
Bra015634 Brassica rapa Bra015634 I 0.761
Bra017879 Brassica rapa Bra017879 I 0.768
Bra024222 Brassica rapa Bra024222 I
Bra024357 Brassica rapa Bra024357 I
Bra024358 Brassica rapa Bra024358 I 0.746
Bra026280 Brassica rapa Bra026280 I
Bra031371 Brassica rapa Bra031371 I 0.761
Bra031880 Brassica rapa Bra031880 I 0.690
Bra040381 Brassica rapa Bra040381 I 0.761
BRADI1G71740 Brachypodium distachyon BRADI1G71740 I 0.745
BRADI3G24000 Brachypodium distachyon BRADI3G24000 I 0.750
BRADI3G35560 Brachypodium distachyon BRADI3G35560 I 0.758
BRADI4G29010 Brachypodium distachyon BRADI4G29010 I 0.761
Cagra.0096s0029 Capsella grandiflora Cagra.0096s0029 I 0.761
Cagra.0917s0073 Capsella grandiflora Cagra.0917s0073 I 0.686
Cagra.1225s0083 Capsella grandiflora Cagra.1225s0083 I
Cagra.1707s0001 Capsella grandiflora Cagra.1707s0001 I 0.761
Cagra.5414s0001 Capsella grandiflora Cagra.5414s0001 I 0.761
Cagra.8551s0004 Capsella grandiflora Cagra.8551s0004 I 0.756
Carubv10005203m.g Capsella rubella Carubv10005203m.g I
Carubv10007787m.g Capsella rubella Carubv10007787m.g I 0.761
Carubv10009949m.g Capsella rubella Carubv10009949m.g I 0.761
Carubv10012538m.g Capsella rubella Carubv10012538m.g I 0.761
Carubv10014129m.g Capsella rubella Carubv10014129m.g I 0.756
Carubv10020567m.g Capsella rubella Carubv10020567m.g I 0.761
Carubv10026925m.g Capsella rubella Carubv10026925m.g I 0.686
cassava10153.m1 Manihot esculenta cassava10153.m1 I 0.761
cassava14392.m1 Manihot esculenta cassava14392.m1 I 0.764
cassava23925.valid.m1 Manihot esculenta cassava23925.valid.m1 I 0.765
cassava27742.m1 Manihot esculenta cassava27742.m1 I 0.783
cassava31195.valid.m1 Manihot esculenta cassava31195.valid.m1 I 0.765
cassava36179.valid.m1 Manihot esculenta cassava36179.valid.m1 I 0.764
Ca_09578 Cicer arietinum Ca_09578 I 0.764
Ca_16631 Cicer arietinum Ca_16631 I 0.761
Ca_23799 Cicer arietinum Ca_23799 I 0.748
chr2.CM0608.10.nd Lotus japonicus chr2.CM0608.10.nd I 0.748
chr4.CM0307.180.nc Lotus japonicus chr4.CM0307.180.nc I 0.734
chr5.CM0909.290.nc Lotus japonicus chr5.CM0909.290.nc I
Ciclev10001563m.g Citrus clementina Ciclev10001563m.g I 0.761
Ciclev10007069m.g Citrus clementina Ciclev10007069m.g I 0.791
Ciclev10025961m.g Citrus clementina Ciclev10025961m.g I 0.765
Cla003007 Citrullus lanatus Cla003007 I 0.772
Cla014376 Citrullus lanatus Cla014376 I 0.761
Cla022420 Citrullus lanatus Cla022420 I 0.761
Cla023489 Citrullus lanatus Cla023489 I 0.761
Cucsa.064390 Cucumis sativus Cucsa.064390 I 0.761
Cucsa.104510 Cucumis sativus Cucsa.104510 I 0.761
Cucsa.154520 Cucumis sativus Cucsa.154520 I 0.761
Cucsa.193930 Cucumis sativus Cucsa.193930 I 0.772
Eucgr.F00497 Eucalyptus grandis Eucgr.F00497 I 0.761
Eucgr.F02440 Eucalyptus grandis Eucgr.F02440 I 0.761
Eucgr.H02782 Eucalyptus grandis Eucgr.H02782 I 0.784
Eucgr.I00422 Eucalyptus grandis Eucgr.I00422 I 0.761
Eucgr.L03532 Eucalyptus grandis Eucgr.L03532 I 0.761
evm.TU.supercontig_36.112 Carica papaya evm.TU.supercontig_36.112 I 0.761
evm.TU.supercontig_996.1 Carica papaya evm.TU.supercontig_996.1 I 0.761
e_gw1.187.17.1 Physcomitrella patens e_gw1.187.17.1 I 0.767
e_gw1.335.26.1 Physcomitrella patens e_gw1.335.26.1 I 0.757
fgenesh2_kg.1__2408__AT1G22190.1 Arabidopsis lyrata fgenesh2_kg.1__2408__AT1G22190.1 I 0.761
fgenesh2_kg.1__3660__AT1G36060.1 Arabidopsis lyrata fgenesh2_kg.1__3660__AT1G36060.1 I 0.761
RAP2.4 Arabidopsis lyrata fgenesh2_kg.2__2105__AT1G78080.1 I 0.761
fgenesh2_kg.7__1395__AT4G28140.1 Arabidopsis lyrata fgenesh2_kg.7__1395__AT4G28140.1 I
fgenesh2_kg.7__195__AT4G39780.1 Arabidopsis lyrata fgenesh2_kg.7__195__AT4G39780.1 I 0.768
gene06669-v1.0-hybrid Fragaria vesca gene06669-v1.0-hybrid I 0.784
gene16350-v1.0-hybrid Fragaria vesca gene16350-v1.0-hybrid I 0.748
gene22114-v1.0-hybrid Fragaria vesca gene22114-v1.0-hybrid I 0.761
GLYMA04G11290 Glycine max GLYMA04G11290 I 0.761
GLYMA05G31370 Glycine max GLYMA05G31370 I 0.767
GLYMA06G11010 Glycine max GLYMA06G11010 I 0.761
GLYMA08G14600 Glycine max GLYMA08G14600 I 0.767
GLYMA13G01930 Glycine max GLYMA13G01930 I 0.761
GLYMA14G34590 Glycine max GLYMA14G34590 I 0.761
GLYMA18G02170 Glycine max GLYMA18G02170 I 0.767
Gorai.003G038200 Gossypium raimondii Gorai.003G038200 I 0.765
Gorai.005G093500 Gossypium raimondii Gorai.005G093500 I 0.782
Gorai.006G207800 Gossypium raimondii Gorai.006G207800 I
Gorai.008G153600 Gossypium raimondii Gorai.008G153600 I 0.765
Gorai.008G253900 Gossypium raimondii Gorai.008G253900 I
Gorai.009G238800 Gossypium raimondii Gorai.009G238800 I 0.761
Gorai.010G043200 Gossypium raimondii Gorai.010G043200 I 0.761
Gorai.011G157500 Gossypium raimondii Gorai.011G157500 I 0.791
Gorai.012G130600 Gossypium raimondii Gorai.012G130600 I
GRMZM2G003466 Zea mays GRMZM2G003466 I 0.766
GRMZM2G039870 Zea mays GRMZM2G039870 I 0.758
GRMZM2G061487 Zea mays GRMZM2G061487 I 0.795
GRMZM2G100982 Zea mays GRMZM2G100982 I
GRMZM2G113060 Zea mays GRMZM2G113060 I 0.759
GRMZM2G141679 Zea mays GRMZM2G141679 I 0.761
GRMZM5G846057 Zea mays GRMZM5G846057 I
GSMUA_Achr10G19030_001 Musa acuminata GSMUA_Achr10G19030_001 I 0.761
GSMUA_Achr10G30440_001 Musa acuminata GSMUA_Achr10G30440_001 I 0.761
GSMUA_Achr3G01650_001 Musa acuminata GSMUA_Achr3G01650_001 I 0.761
GSMUA_Achr3G04360_001 Musa acuminata GSMUA_Achr3G04360_001 I 0.749
GSMUA_Achr4G26080_001 Musa acuminata GSMUA_Achr4G26080_001 I 0.739
GSMUA_Achr9G12950_001 Musa acuminata GSMUA_Achr9G12950_001 I 0.765
GSMUA_AchrUn_randomG20840_001 Musa acuminata GSMUA_AchrUn_randomG20840_001 I 0.761
LjSGA_026196.1 Lotus japonicus LjSGA_026196.1 I 0.761
LPERR03G05980 Leersia perrieri LPERR03G05980 I 0.762
LPERR06G07210 Leersia perrieri LPERR06G07210 I 0.737
LPERR08G11750 Leersia perrieri LPERR08G11750 I 0.759
LPERR09G05410 Leersia perrieri LPERR09G05410 I 0.761
Lus10000582.g Linum usitatissimum Lus10000582.g I 0.758
Lus10007124.g Linum usitatissimum Lus10007124.g I 0.778
Lus10016669.g Linum usitatissimum Lus10016669.g I 0.782
Lus10016801.g Linum usitatissimum Lus10016801.g I 0.761
Lus10019665.g Linum usitatissimum Lus10019665.g I 0.758
Lus10020913.g Linum usitatissimum Lus10020913.g I 0.761
Lus10022497.g Linum usitatissimum Lus10022497.g I 0.747
Lus10033463.g Linum usitatissimum Lus10033463.g I 0.761
MDP0000246184 Malus domestica MDP0000246184 I 0.794
MDP0000313476 Malus domestica MDP0000313476 I 0.761
MDP0000453797 Malus domestica MDP0000453797 I 0.761
MDP0000683814 Malus domestica MDP0000683814 I 0.761
MDP0000865032 Malus domestica MDP0000865032 I 0.761
mgf002388m Mimulus guttatus mgf002388m I 0.761
mgf012639m Mimulus guttatus mgf012639m I 0.768
mgf016403m Mimulus guttatus mgf016403m I
mgf021372m Mimulus guttatus mgf021372m I 0.774
mgf022495m Mimulus guttatus mgf022495m I 0.742
mgf023311m Mimulus guttatus mgf023311m I 0.765
MTR_3g074130 Medicago truncatula MTR_3g074130 I 0.761
MTR_5g062700 Medicago truncatula MTR_5g062700 I 0.761
MTR_8g090350 Medicago truncatula MTR_8g090350 I 0.764
OB09G15200 Oryza brachyantha OB09G15200 I 0.761
OBART08G14280 Oryza barthii OBART08G14280 I 0.759
OBART09G07840 Oryza barthii OBART09G07840 I 0.743
OGLUM03G06750 Oryza glumaepatula OGLUM03G06750 I 0.769
OGLUM08G15030 Oryza glumaepatula OGLUM08G15030 I 0.759
OGLUM09G08150 Oryza glumaepatula OGLUM09G08150 I 0.761
OMERI03G06570 Oryza meridionalis OMERI03G06570 I 0.769
OMERI09G06210 Oryza meridionalis OMERI09G06210 I 0.761
OMERI09G06220 Oryza meridionalis OMERI09G06220 I 0.761
ONIVA03G06360 Oryza nivara ONIVA03G06360 I 0.769
ONIVA08G15160 Oryza nivara ONIVA08G15160 I 0.759
ONIVA09G06980 Oryza nivara ONIVA09G06980 I 0.761
OPUNC03G06400 Oryza punctata OPUNC03G06400 I 0.769
OPUNC08G13450 Oryza punctata OPUNC08G13450 I 0.759
OPUNC09G06680 Oryza punctata OPUNC09G06680 I 0.761
orange1.1g015775m.g Citrus sinensis orange1.1g015775m.g I 0.791
orange1.1g017798m.g Citrus sinensis orange1.1g017798m.g I 0.761
orange1.1g018103m.g Citrus sinensis orange1.1g018103m.g I 0.765
ORGLA03G0064600 Oryza glaberrima ORGLA03G0064600 I 0.769
ORGLA08G0124900 Oryza glaberrima ORGLA08G0124900 I 0.759
ORGLA09G0057100 Oryza glaberrima ORGLA09G0057100 I 0.761
ORUFI03G06570 Oryza rufipogon ORUFI03G06570 I 0.769
ORUFI08G16150 Oryza rufipogon ORUFI08G16150 I 0.759
ORUFI09G08380 Oryza rufipogon ORUFI09G08380 I 0.761
OS03G0191900 Oryza sativa OS03G0191900 I 0.769
OS08G0408500 Oryza sativa OS08G0408500 I 0.759
Pavir.Ba02199 Panicum virgatum Pavir.Ba02199 I 0.761
Pavir.Bb01980 Panicum virgatum Pavir.Bb01980 I 0.761
Pavir.Fa01600 Panicum virgatum Pavir.Fa01600 I 0.761
Pavir.Fb01192 Panicum virgatum Pavir.Fb01192 I 0.761
Pavir.Ia02495 Panicum virgatum Pavir.Ia02495 I 0.754
Pavir.Ia04894 Panicum virgatum Pavir.Ia04894 I 0.766
Pavir.Ib02920 Panicum virgatum Pavir.Ib02920 I 0.754
Pavir.J13316 Panicum virgatum Pavir.J13316 I 0.735
Pavir.J25956 Panicum virgatum Pavir.J25956 I 0.761
PGSC0003DMG400008538 Solanum tuberosum PGSC0003DMG400008538 I 0.765
PGSC0003DMG400009475 Solanum tuberosum PGSC0003DMG400009475 I 0.771
PGSC0003DMG400018352 Solanum tuberosum PGSC0003DMG400018352 I 0.743
PGSC0003DMG400020625 Solanum tuberosum PGSC0003DMG400020625 I 0.765
PGSC0003DMG400031294 Solanum tuberosum PGSC0003DMG400031294 I 0.782
PK18885.1 Cannabis sativa PK18885.1 I 0.765
PK27482.1 Cannabis sativa PK27482.1 I 0.761
Pm002052 Prunus mume Pm002052 I 0.761
Pm004824 Prunus mume Pm004824 I 0.761
Pm009494 Prunus mume Pm009494 I 0.786
POPTR_0002s09480 Populus trichocarpa POPTR_0002s09480 I 0.761
POPTR_0005s07900 Populus trichocarpa POPTR_0005s07900 I 0.765
POPTR_0005s16690 Populus trichocarpa POPTR_0005s16690 I 0.761
POPTR_0007s05690 Populus trichocarpa POPTR_0007s05690 I 0.765
PRUPE_ppa007193mg Prunus persica PRUPE_ppa007193mg I 0.761
PRUPE_ppa008234mg Prunus persica PRUPE_ppa008234mg I 0.761
PRUPE_ppa010345mg Prunus persica PRUPE_ppa010345mg I 0.781
PRUPE_ppa020676mg Prunus persica PRUPE_ppa020676mg I 0.761
SapurV1A.0010s0170 Salix purpurea SapurV1A.0010s0170 I 0.761
SapurV1A.0075s0120 Salix purpurea SapurV1A.0075s0120 I 0.765
SapurV1A.0335s0040 Salix purpurea SapurV1A.0335s0040 I 0.764
SapurV1A.0684s0120 Salix purpurea SapurV1A.0684s0120 I 0.765
SapurV1A.1542s0030 Salix purpurea SapurV1A.1542s0030 I 0.783
SapurV1A.6751s0010 Salix purpurea SapurV1A.6751s0010 I 0.783
Sb01g044410 Sorghum bicolor Sb01g044410 I 0.766
Sb02g023230 Sorghum bicolor Sb02g023230 I 0.761
Sb07g020090 Sorghum bicolor Sb07g020090 I 0.761
scaffold_400172.1 Arabidopsis lyrata scaffold_400172.1 I 0.750
SELMODRAFT_104980 Selaginella moellendorffii SELMODRAFT_104980 I 0.749
SELMODRAFT_15839 Selaginella moellendorffii SELMODRAFT_15839 I 0.738
SELMODRAFT_73149 Selaginella moellendorffii SELMODRAFT_73149 I 0.735
Si030684m.g Setaria italica Si030684m.g I 0.761
Si036827m.g Setaria italica Si036827m.g I 0.766
Si036893m.g Setaria italica Si036893m.g I 0.758
Solyc04g054910.2 Solanum lycopersicum Solyc04g054910.2 I 0.765
Solyc04g072900.1 Solanum lycopersicum Solyc04g072900.1 I 0.771
Solyc07g054220.1 Solanum lycopersicum Solyc07g054220.1 I 0.743
Solyc09g091950.1 Solanum lycopersicum Solyc09g091950.1 I 0.782
Solyc12g056980.1 Solanum lycopersicum Solyc12g056980.1 I 0.765
TCM_001147 Theobroma cacao TCM_001147 I 0.765
TCM_020321 Theobroma cacao TCM_020321 I 0.799
TCM_034939 Theobroma cacao TCM_034939 I 0.761
Thhalv10005326m.g Eutrema salsugineum Thhalv10005326m.g I 0.745
Thhalv10008326m.g Eutrema salsugineum Thhalv10008326m.g I 0.761
Thhalv10018771m.g Eutrema salsugineum Thhalv10018771m.g I 0.761
Thhalv10025862m.g Eutrema salsugineum Thhalv10025862m.g I
Thhalv10025958m.g Eutrema salsugineum Thhalv10025958m.g I 0.768
Traes_4AS_1E79E1072 Triticum aestivum Traes_4AS_1E79E1072 I 0.761
Traes_4BL_71E35BBC1 Triticum aestivum Traes_4BL_71E35BBC1 I 0.761
Traes_5BL_4D65B66E2 Triticum aestivum Traes_5BL_4D65B66E2 I 0.761
VIT_00s0662g00030 Vitis vinifera VIT_00s0662g00030 I 0.765
VIT_00s0662g00040 Vitis vinifera VIT_00s0662g00040 I 0.765
VIT_05s0029g00140 Vitis vinifera VIT_05s0029g00140 I 0.781
VIT_18s0001g05250 Vitis vinifera VIT_18s0001g05250 I 0.761
VIT_19s0014g03180 Vitis vinifera VIT_19s0014g03180 I