MTR_1g023170 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_1g023170 T002771_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.765 0.918
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.765 0.918
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.765 0.918
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.720 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.688 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES59595 AP2 38 89

Links

Other AP2 family TFs
Other Medicago truncatula TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29801.m003200 Ricinus communis 29801.m003200 N 0.000
AT3G19184 Arabidopsis thaliana AT3G19184 N 0.000
Bo6g124000 Brassica oleracea Bo6g124000 N 0.000
Bostr.19424s0744 Boechera stricta Bostr.19424s0744 N 0.000
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N 0.000
Cagra.5742s0010 Capsella grandiflora Cagra.5742s0010 N 0.000
Carubv10014420m.g Capsella rubella Carubv10014420m.g N 0.000
Ciclev10002314m.g Citrus clementina Ciclev10002314m.g N 0.000
Ciclev10029072m.g Citrus clementina Ciclev10029072m.g N 0.000
Cla016258 Citrullus lanatus Cla016258 N 0.000
Cucsa.219930 Cucumis sativus Cucsa.219930 N 0.000
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N 0.000
F775_06135 Aegilops tauschii F775_06135 N 0.000
fgenesh2_kg.3__2134__AT3G19184.1 Arabidopsis lyrata fgenesh2_kg.3__2134__AT3G19184.1 N 0.000
Gorai.002G131600 Gossypium raimondii Gorai.002G131600 N 0.000
Gorai.013G042700 Gossypium raimondii Gorai.013G042700 N 0.000
GRMZM2G106673 Zea mays GRMZM2G106673 N 0.000
LPERR06G05590 Leersia perrieri LPERR06G05590 N 0.000
Lus10014044.g Linum usitatissimum Lus10014044.g N 0.000
Lus10019870.g Linum usitatissimum Lus10019870.g N 0.000
mgf008645m Mimulus guttatus mgf008645m N 0.000
MTR_3g101520 Medicago truncatula MTR_3g101520 N 0.000
orange1.1g026276m.g Citrus sinensis orange1.1g026276m.g N 0.000
orange1.1g036915m.g Citrus sinensis orange1.1g036915m.g N 0.000
PGSC0003DMG400025792 Solanum tuberosum PGSC0003DMG400025792 N 0.000
PK25650.1 Cannabis sativa PK25650.1 N 0.000
POPTR_0009s10590 Populus trichocarpa POPTR_0009s10590 N 0.000
PRUPE_ppb024440mg Prunus persica PRUPE_ppb024440mg N 0.000
SapurV1A.0090s0770 Salix purpurea SapurV1A.0090s0770 N 0.000
Sb07g006170 Sorghum bicolor Sb07g006170 N 0.000
Si014404m.g Setaria italica Si014404m.g N 0.000
Solyc01g108140.2 Solanum lycopersicum Solyc01g108140.2 N 0.000
TCM_007039 Theobroma cacao TCM_007039 N 0.000
Thhalv10019015m.g Eutrema salsugineum Thhalv10019015m.g N 0.000
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N 0.000
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N 0.000