Gorai.001G105100 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.001G105100 T008470_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G105100.1 AP2 105 153
Gorai.001G105100.2 AP2 105 153
Gorai.001G105100.3 AP2 105 153

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30217.m000254 Ricinus communis 30217.m000254 N 0.688
AMTR_s00013p00252260 Amborella trichopoda AMTR_s00013p00252260 N 0.769
AT4G13040 Arabidopsis thaliana AT4G13040 N 0.738
BGIOSGA008254 Oryza indica BGIOSGA008254 N 0.765
Bo11579s010 Brassica oleracea Bo11579s010 N 0.716
Bo8g033910 Brassica oleracea Bo8g033910 N 0.732
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N 0.732
Bra034895 Brassica rapa Bra034895 N 0.732
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N 0.759
Cagra.2997s0002 Capsella grandiflora Cagra.2997s0002 N 0.732
Carubv10005663m.g Capsella rubella Carubv10005663m.g N 0.732
cassava38073.valid.m1 Manihot esculenta cassava38073.valid.m1 N 0.767
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N 0.776
Ca_11707 Cicer arietinum Ca_11707 N 0.756
Ca_17230 Cicer arietinum Ca_17230 N 0.763
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N 0.776
chr3.CM0423.200.nd Lotus japonicus chr3.CM0423.200.nd N 0.756
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N 0.782
Cla002744 Citrullus lanatus Cla002744 N 0.779
Cla015151 Citrullus lanatus Cla015151 N 0.748
Cucsa.078000 Cucumis sativus Cucsa.078000 N 0.748
Cucsa.150110 Cucumis sativus Cucsa.150110 N 0.760
estExt_fgenesh1_pg.C_930051 Physcomitrella patens estExt_fgenesh1_pg.C_930051 N 0.701
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N 0.711
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N 0.782
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N 0.730
F775_30629 Aegilops tauschii F775_30629 N 0.686
GLYMA08G46250 Glycine max GLYMA08G46250 N 0.768
GLYMA18G33460 Glycine max GLYMA18G33460 N 0.766
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N 0.776
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N 0.782
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N 0.776
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N 0.717
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N 0.742
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N 0.760
LPERR02G13930 Leersia perrieri LPERR02G13930 N 0.765
Lus10011836.g Linum usitatissimum Lus10011836.g N 0.773
Lus10022769.g Linum usitatissimum Lus10022769.g N 0.773
MDP0000129941 Malus domestica MDP0000129941 N 0.776
MDP0000300382 Malus domestica MDP0000300382 N 0.776
MDP0000675982 Malus domestica MDP0000675982 N 0.776
mgf003491m Mimulus guttatus mgf003491m N 0.770
mgf003727m Mimulus guttatus mgf003727m N 0.697
mgf007349m Mimulus guttatus mgf007349m N 0.770
MTR_7g055857 Medicago truncatula MTR_7g055857 N 0.753
MTR_8g012655 Medicago truncatula MTR_8g012655 N 0.753
OB02G25330 Oryza brachyantha OB02G25330 N 0.765
OBART02G17450 Oryza barthii OBART02G17450 N 0.765
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N 0.765
OLONG_009588 Oryza longistaminata OLONG_009588 N 0.755
ONIVA02G18870 Oryza nivara ONIVA02G18870 N 0.765
OPUNC02G15530 Oryza punctata OPUNC02G15530 N 0.765
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N 0.782
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N 0.765
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N 0.765
OS02G0499000 Oryza sativa OS02G0499000 N 0.765
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N 0.759
Pavir.J28064 Panicum virgatum Pavir.J28064 N 0.759
PDK_20s1512801g001 Phoenix dactylifera PDK_20s1512801g001 N 0.702
PGSC0003DMG400017485 Solanum tuberosum PGSC0003DMG400017485 N 0.771
PK01824.1 Cannabis sativa PK01824.1 N 0.760
Pm020315 Prunus mume Pm020315 N 0.782
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N 0.782
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N 0.782
Sb04g020150 Sorghum bicolor Sb04g020150 N 0.759
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N 0.723
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N 0.723
Si018306m.g Setaria italica Si018306m.g N 0.759
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N 0.771
TCM_002835 Theobroma cacao TCM_002835 N 0.782
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N 0.732
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N 0.759
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N 0.759
TRIUR3_27883 Triticum urartu TRIUR3_27883 N 0.686
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N 0.760