Lus10022769.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10022769.g T008838_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10022769 AP2 105 153

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10011836.g Linum usitatissimum Lus10011836.g N 0.782
GLYMA18G33460 Glycine max GLYMA18G33460 N 0.776
cassava38073.valid.m1 Manihot esculenta cassava38073.valid.m1 N 0.776
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N 0.773
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N 0.773
TCM_002835 Theobroma cacao TCM_002835 N 0.773
Pm020315 Prunus mume Pm020315 N 0.773
mgf003491m Mimulus guttatus mgf003491m N 0.773
mgf007349m Mimulus guttatus mgf007349m N 0.773
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N 0.773
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N 0.773
Gorai.001G105100 Gossypium raimondii Gorai.001G105100 N 0.773
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N 0.773
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N 0.773
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N 0.773
AMTR_s00013p00252260 Amborella trichopoda AMTR_s00013p00252260 N 0.772
GLYMA08G46250 Glycine max GLYMA08G46250 N 0.771
Cla002744 Citrullus lanatus Cla002744 N 0.769
BGIOSGA008254 Oryza indica BGIOSGA008254 N 0.768
LPERR02G13930 Leersia perrieri LPERR02G13930 N 0.768
OB02G25330 Oryza brachyantha OB02G25330 N 0.768
OBART02G17450 Oryza barthii OBART02G17450 N 0.768
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N 0.768
ONIVA02G18870 Oryza nivara ONIVA02G18870 N 0.768
OPUNC02G15530 Oryza punctata OPUNC02G15530 N 0.768
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N 0.768
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N 0.768
OS02G0499000 Oryza sativa OS02G0499000 N 0.768
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N 0.766
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N 0.766
MDP0000129941 Malus domestica MDP0000129941 N 0.766
MDP0000300382 Malus domestica MDP0000300382 N 0.766
MDP0000675982 Malus domestica MDP0000675982 N 0.766
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N 0.766
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N 0.763
Ca_17230 Cicer arietinum Ca_17230 N 0.763
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N 0.762
MTR_8g012655 Medicago truncatula MTR_8g012655 N 0.762
PGSC0003DMG400017485 Solanum tuberosum PGSC0003DMG400017485 N 0.762
Sb04g020150 Sorghum bicolor Sb04g020150 N 0.762
Si018306m.g Setaria italica Si018306m.g N 0.762
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N 0.762
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N 0.762
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N 0.762
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N 0.762
Pavir.J28064 Panicum virgatum Pavir.J28064 N 0.762
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N 0.760
Cucsa.150110 Cucumis sativus Cucsa.150110 N 0.760
OLONG_009588 Oryza longistaminata OLONG_009588 N 0.755
MTR_7g055857 Medicago truncatula MTR_7g055857 N 0.753
Cla015151 Citrullus lanatus Cla015151 N 0.751
Cucsa.078000 Cucumis sativus Cucsa.078000 N 0.751
PK01824.1 Cannabis sativa PK01824.1 N 0.751
Ca_11707 Cicer arietinum Ca_11707 N 0.747
chr3.CM0423.200.nd Lotus japonicus chr3.CM0423.200.nd N 0.747
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N 0.746
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N 0.740
AT4G13040 Arabidopsis thaliana AT4G13040 N 0.729
Bo8g033910 Brassica oleracea Bo8g033910 N 0.723
Bra034895 Brassica rapa Bra034895 N 0.723
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N 0.723
Cagra.2997s0002 Capsella grandiflora Cagra.2997s0002 N 0.723
Carubv10005663m.g Capsella rubella Carubv10005663m.g N 0.723
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N 0.723
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N 0.720
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N 0.720
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N 0.717
Bo11579s010 Brassica oleracea Bo11579s010 N 0.716
estExt_fgenesh1_pg.C_930051 Physcomitrella patens estExt_fgenesh1_pg.C_930051 N 0.711
PDK_20s1512801g001 Phoenix dactylifera PDK_20s1512801g001 N 0.711
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N 0.701
mgf003727m Mimulus guttatus mgf003727m N 0.700
30217.m000254 Ricinus communis 30217.m000254 N 0.697
F775_30629 Aegilops tauschii F775_30629 N 0.689
TRIUR3_27883 Triticum urartu TRIUR3_27883 N 0.689