PGSC0003DMG400017485 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400017485 T004438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400045091 AP2 105 153

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc09g059510.2 Solanum lycopersicum Solyc09g059510.2 N 0.786
BGIOSGA008254 Oryza indica BGIOSGA008254 N 0.779
LPERR02G13930 Leersia perrieri LPERR02G13930 N 0.779
OB02G25330 Oryza brachyantha OB02G25330 N 0.779
OBART02G17450 Oryza barthii OBART02G17450 N 0.779
OGLUM02G17700 Oryza glumaepatula OGLUM02G17700 N 0.779
ONIVA02G18870 Oryza nivara ONIVA02G18870 N 0.779
OPUNC02G15530 Oryza punctata OPUNC02G15530 N 0.779
ORGLA02G0152600 Oryza glaberrima ORGLA02G0152600 N 0.779
ORUFI02G18290 Oryza rufipogon ORUFI02G18290 N 0.779
OS02G0499000 Oryza sativa OS02G0499000 N 0.779
BRADI3G43822 Brachypodium distachyon BRADI3G43822 N 0.773
Sb04g020150 Sorghum bicolor Sb04g020150 N 0.773
Si018306m.g Setaria italica Si018306m.g N 0.773
Traes_6AL_13895C140 Triticum aestivum Traes_6AL_13895C140 N 0.773
Traes_6DS_43372C0A6 Triticum aestivum Traes_6DS_43372C0A6 N 0.773
Pavir.Aa01947 Panicum virgatum Pavir.Aa01947 N 0.773
Pavir.J28064 Panicum virgatum Pavir.J28064 N 0.773
POPTR_0002s24750 Populus trichocarpa POPTR_0002s24750 N 0.771
PRUPE_ppa011812mg Prunus persica PRUPE_ppa011812mg N 0.771
TCM_002835 Theobroma cacao TCM_002835 N 0.771
Pm020315 Prunus mume Pm020315 N 0.771
Ciclev10021891m.g Citrus clementina Ciclev10021891m.g N 0.771
evm.TU.supercontig_21.106 Carica papaya evm.TU.supercontig_21.106 N 0.771
Gorai.001G105100 Gossypium raimondii Gorai.001G105100 N 0.771
Gorai.001G231300 Gossypium raimondii Gorai.001G231300 N 0.771
orange1.1g025914m.g Citrus sinensis orange1.1g025914m.g N 0.771
OLONG_009588 Oryza longistaminata OLONG_009588 N 0.770
Cla002744 Citrullus lanatus Cla002744 N 0.768
cassava6828.valid.m1 Manihot esculenta cassava6828.valid.m1 N 0.765
Gorai.001G188300 Gossypium raimondii Gorai.001G188300 N 0.765
Gorai.007G156300 Gossypium raimondii Gorai.007G156300 N 0.765
MDP0000129941 Malus domestica MDP0000129941 N 0.765
MDP0000300382 Malus domestica MDP0000300382 N 0.765
MDP0000675982 Malus domestica MDP0000675982 N 0.765
chr1.LjT46N10.100.nd Lotus japonicus chr1.LjT46N10.100.nd N 0.765
Lus10011836.g Linum usitatissimum Lus10011836.g N 0.762
Lus10022769.g Linum usitatissimum Lus10022769.g N 0.762
mgf003491m Mimulus guttatus mgf003491m N 0.759
mgf007349m Mimulus guttatus mgf007349m N 0.759
AMTR_s00013p00252260 Amborella trichopoda AMTR_s00013p00252260 N 0.758
GLYMA08G46250 Glycine max GLYMA08G46250 N 0.757
cassava38073.valid.m1 Manihot esculenta cassava38073.valid.m1 N 0.756
GLYMA18G33460 Glycine max GLYMA18G33460 N 0.755
Ca_17230 Cicer arietinum Ca_17230 N 0.752
GSMUA_Achr9G01590_001 Musa acuminata GSMUA_Achr9G01590_001 N 0.749
VIT_00s0184g00010 Vitis vinifera VIT_00s0184g00010 N 0.749
Cucsa.150110 Cucumis sativus Cucsa.150110 N 0.749
PK01824.1 Cannabis sativa PK01824.1 N 0.749
Ca_11707 Cicer arietinum Ca_11707 N 0.745
chr3.CM0423.200.nd Lotus japonicus chr3.CM0423.200.nd N 0.745
MTR_7g055857 Medicago truncatula MTR_7g055857 N 0.742
MTR_8g012655 Medicago truncatula MTR_8g012655 N 0.742
SELMODRAFT_420254 Selaginella moellendorffii SELMODRAFT_420254 N 0.738
SELMODRAFT_443366 Selaginella moellendorffii SELMODRAFT_443366 N 0.738
Cla015151 Citrullus lanatus Cla015151 N 0.737
Cucsa.078000 Cucumis sativus Cucsa.078000 N 0.737
GSMUA_Achr8G00300_001 Musa acuminata GSMUA_Achr8G00300_001 N 0.731
AT4G13040 Arabidopsis thaliana AT4G13040 N 0.727
Bo8g033910 Brassica oleracea Bo8g033910 N 0.721
Bra034895 Brassica rapa Bra034895 N 0.721
Bostr.2021s0045 Boechera stricta Bostr.2021s0045 N 0.721
Cagra.2997s0002 Capsella grandiflora Cagra.2997s0002 N 0.721
Carubv10005663m.g Capsella rubella Carubv10005663m.g N 0.721
Thhalv10026242m.g Eutrema salsugineum Thhalv10026242m.g N 0.721
e_gw1.317.27.1 Physcomitrella patens e_gw1.317.27.1 N 0.719
mgf003727m Mimulus guttatus mgf003727m N 0.712
Eucgr.K02136 Eucalyptus grandis Eucgr.K02136 N 0.711
GSMUA_Achr6G06510_001 Musa acuminata GSMUA_Achr6G06510_001 N 0.706
Bo11579s010 Brassica oleracea Bo11579s010 N 0.705
F775_30629 Aegilops tauschii F775_30629 N 0.700
TRIUR3_27883 Triticum urartu TRIUR3_27883 N 0.700
PDK_20s1512801g001 Phoenix dactylifera PDK_20s1512801g001 N 0.691
estExt_fgenesh1_pg.C_930051 Physcomitrella patens estExt_fgenesh1_pg.C_930051 N 0.690
30217.m000254 Ricinus communis 30217.m000254 N 0.677