CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA08G46250
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA08G46250
T001861_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA08G46250.2
AP2
107
155
CIMRGVYFKNMKWQAAIKVDKKQIHLGTLGSQEEAAHLYDRAAFMCGRE
GLYMA08G46250.3
AP2
107
155
CIMRGVYFKNMKWQAAIKVDKKQIHLGTLGSQEEAAHLYDRAAFMCGRE
GLYMA08G46250.4
AP2
107
155
CIMRGVYFKNMKWQAAIKVDKKQIHLGTLGSQEEAAHLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Glycine max
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00013p00252260
Amborella trichopoda
AMTR_s00013p00252260
N
0.784
GLYMA18G33460
Glycine max
GLYMA18G33460
N
0.781
cassava6828.valid.m1
Manihot esculenta
cassava6828.valid.m1
N
0.778
Gorai.001G188300
Gossypium raimondii
Gorai.001G188300
N
0.778
MDP0000129941
Malus domestica
MDP0000129941
N
0.778
MDP0000300382
Malus domestica
MDP0000300382
N
0.778
MDP0000675982
Malus domestica
MDP0000675982
N
0.778
chr1.LjT46N10.100.nd
Lotus japonicus
chr1.LjT46N10.100.nd
N
0.778
Lus10011836.g
Linum usitatissimum
Lus10011836.g
N
0.771
Lus10022769.g
Linum usitatissimum
Lus10022769.g
N
0.771
POPTR_0002s24750
Populus trichocarpa
POPTR_0002s24750
N
0.768
PRUPE_ppa011812mg
Prunus persica
PRUPE_ppa011812mg
N
0.768
TCM_002835
Theobroma cacao
TCM_002835
N
0.768
VIT_00s0184g00010
Vitis vinifera
VIT_00s0184g00010
N
0.768
Pm020315
Prunus mume
Pm020315
N
0.768
Cucsa.150110
Cucumis sativus
Cucsa.150110
N
0.768
mgf003491m
Mimulus guttatus
mgf003491m
N
0.768
mgf007349m
Mimulus guttatus
mgf007349m
N
0.768
Ciclev10021891m.g
Citrus clementina
Ciclev10021891m.g
N
0.768
evm.TU.supercontig_21.106
Carica papaya
evm.TU.supercontig_21.106
N
0.768
Gorai.001G105100
Gossypium raimondii
Gorai.001G105100
N
0.768
Gorai.001G231300
Gossypium raimondii
Gorai.001G231300
N
0.768
orange1.1g025914m.g
Citrus sinensis
orange1.1g025914m.g
N
0.768
Cla015151
Citrullus lanatus
Cla015151
N
0.765
cassava38073.valid.m1
Manihot esculenta
cassava38073.valid.m1
N
0.765
Cucsa.078000
Cucumis sativus
Cucsa.078000
N
0.765
Gorai.007G156300
Gossypium raimondii
Gorai.007G156300
N
0.765
Cla002744
Citrullus lanatus
Cla002744
N
0.764
BGIOSGA008254
Oryza indica
BGIOSGA008254
N
0.763
LPERR02G13930
Leersia perrieri
LPERR02G13930
N
0.763
OB02G25330
Oryza brachyantha
OB02G25330
N
0.763
OBART02G17450
Oryza barthii
OBART02G17450
N
0.763
OGLUM02G17700
Oryza glumaepatula
OGLUM02G17700
N
0.763
ONIVA02G18870
Oryza nivara
ONIVA02G18870
N
0.763
OPUNC02G15530
Oryza punctata
OPUNC02G15530
N
0.763
ORGLA02G0152600
Oryza glaberrima
ORGLA02G0152600
N
0.763
ORUFI02G18290
Oryza rufipogon
ORUFI02G18290
N
0.763
OS02G0499000
Oryza sativa
OS02G0499000
N
0.763
MTR_7g055857
Medicago truncatula
MTR_7g055857
N
0.762
GSMUA_Achr9G01590_001
Musa acuminata
GSMUA_Achr9G01590_001
N
0.758
chr3.CM0423.200.nd
Lotus japonicus
chr3.CM0423.200.nd
N
0.758
BRADI3G43822
Brachypodium distachyon
BRADI3G43822
N
0.757
PGSC0003DMG400017485
Solanum tuberosum
PGSC0003DMG400017485
N
0.757
Sb04g020150
Sorghum bicolor
Sb04g020150
N
0.757
Si018306m.g
Setaria italica
Si018306m.g
N
0.757
Solyc09g059510.2
Solanum lycopersicum
Solyc09g059510.2
N
0.757
Traes_6AL_13895C140
Triticum aestivum
Traes_6AL_13895C140
N
0.757
Traes_6DS_43372C0A6
Triticum aestivum
Traes_6DS_43372C0A6
N
0.757
Pavir.Aa01947
Panicum virgatum
Pavir.Aa01947
N
0.757
Pavir.J28064
Panicum virgatum
Pavir.J28064
N
0.757
Ca_17230
Cicer arietinum
Ca_17230
N
0.755
MTR_8g012655
Medicago truncatula
MTR_8g012655
N
0.751
OLONG_009588
Oryza longistaminata
OLONG_009588
N
0.747
PK01824.1
Cannabis sativa
PK01824.1
N
0.746
Ca_11707
Cicer arietinum
Ca_11707
N
0.742
GSMUA_Achr8G00300_001
Musa acuminata
GSMUA_Achr8G00300_001
N
0.741
SELMODRAFT_420254
Selaginella moellendorffii
SELMODRAFT_420254
N
0.729
SELMODRAFT_443366
Selaginella moellendorffii
SELMODRAFT_443366
N
0.729
e_gw1.317.27.1
Physcomitrella patens
e_gw1.317.27.1
N
0.729
AT4G13040
Arabidopsis thaliana
AT4G13040
N
0.726
Bo8g033910
Brassica oleracea
Bo8g033910
N
0.720
Bra034895
Brassica rapa
Bra034895
N
0.720
Bostr.2021s0045
Boechera stricta
Bostr.2021s0045
N
0.720
Cagra.2997s0002
Capsella grandiflora
Cagra.2997s0002
N
0.720
Carubv10005663m.g
Capsella rubella
Carubv10005663m.g
N
0.720
Thhalv10026242m.g
Eutrema salsugineum
Thhalv10026242m.g
N
0.720
Bo11579s010
Brassica oleracea
Bo11579s010
N
0.710
GSMUA_Achr6G06510_001
Musa acuminata
GSMUA_Achr6G06510_001
N
0.706
estExt_fgenesh1_pg.C_930051
Physcomitrella patens
estExt_fgenesh1_pg.C_930051
N
0.700
PDK_20s1512801g001
Phoenix dactylifera
PDK_20s1512801g001
N
0.700
Eucgr.K02136
Eucalyptus grandis
Eucgr.K02136
N
0.696
mgf003727m
Mimulus guttatus
mgf003727m
N
0.689
30217.m000254
Ricinus communis
30217.m000254
N
0.686
F775_30629
Aegilops tauschii
F775_30629
N
0.684
TRIUR3_27883
Triticum urartu
TRIUR3_27883
N
0.684