CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI3G43822
(
Brachypodium distachyon
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BRADI3G43822
T001336_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI3G43822.1
AP2
154
202
CIKRGVYFKNMKWQAAIKVDKKQIHLGTVGTQDEAARLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Brachypodium distachyon
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb04g020150
Sorghum bicolor
Sb04g020150
N
0.788
Si018306m.g
Setaria italica
Si018306m.g
N
0.788
Traes_6AL_13895C140
Triticum aestivum
Traes_6AL_13895C140
N
0.788
Traes_6DS_43372C0A6
Triticum aestivum
Traes_6DS_43372C0A6
N
0.788
Pavir.Aa01947
Panicum virgatum
Pavir.Aa01947
N
0.788
Pavir.J28064
Panicum virgatum
Pavir.J28064
N
0.788
BGIOSGA008254
Oryza indica
BGIOSGA008254
N
0.780
LPERR02G13930
Leersia perrieri
LPERR02G13930
N
0.780
OB02G25330
Oryza brachyantha
OB02G25330
N
0.780
OBART02G17450
Oryza barthii
OBART02G17450
N
0.780
OGLUM02G17700
Oryza glumaepatula
OGLUM02G17700
N
0.780
ONIVA02G18870
Oryza nivara
ONIVA02G18870
N
0.780
OPUNC02G15530
Oryza punctata
OPUNC02G15530
N
0.780
ORGLA02G0152600
Oryza glaberrima
ORGLA02G0152600
N
0.780
ORUFI02G18290
Oryza rufipogon
ORUFI02G18290
N
0.780
OS02G0499000
Oryza sativa
OS02G0499000
N
0.780
PGSC0003DMG400017485
Solanum tuberosum
PGSC0003DMG400017485
N
0.773
Solyc09g059510.2
Solanum lycopersicum
Solyc09g059510.2
N
0.773
OLONG_009588
Oryza longistaminata
OLONG_009588
N
0.764
Lus10011836.g
Linum usitatissimum
Lus10011836.g
N
0.762
Lus10022769.g
Linum usitatissimum
Lus10022769.g
N
0.762
AMTR_s00013p00252260
Amborella trichopoda
AMTR_s00013p00252260
N
0.759
POPTR_0002s24750
Populus trichocarpa
POPTR_0002s24750
N
0.759
PRUPE_ppa011812mg
Prunus persica
PRUPE_ppa011812mg
N
0.759
TCM_002835
Theobroma cacao
TCM_002835
N
0.759
Pm020315
Prunus mume
Pm020315
N
0.759
mgf003491m
Mimulus guttatus
mgf003491m
N
0.759
mgf007349m
Mimulus guttatus
mgf007349m
N
0.759
Ciclev10021891m.g
Citrus clementina
Ciclev10021891m.g
N
0.759
evm.TU.supercontig_21.106
Carica papaya
evm.TU.supercontig_21.106
N
0.759
Gorai.001G105100
Gossypium raimondii
Gorai.001G105100
N
0.759
Gorai.001G231300
Gossypium raimondii
Gorai.001G231300
N
0.759
orange1.1g025914m.g
Citrus sinensis
orange1.1g025914m.g
N
0.759
GLYMA08G46250
Glycine max
GLYMA08G46250
N
0.757
cassava38073.valid.m1
Manihot esculenta
cassava38073.valid.m1
N
0.756
Gorai.007G156300
Gossypium raimondii
Gorai.007G156300
N
0.756
GLYMA18G33460
Glycine max
GLYMA18G33460
N
0.755
Cla002744
Citrullus lanatus
Cla002744
N
0.755
cassava6828.valid.m1
Manihot esculenta
cassava6828.valid.m1
N
0.752
Gorai.001G188300
Gossypium raimondii
Gorai.001G188300
N
0.752
MDP0000129941
Malus domestica
MDP0000129941
N
0.752
MDP0000300382
Malus domestica
MDP0000300382
N
0.752
MDP0000675982
Malus domestica
MDP0000675982
N
0.752
chr1.LjT46N10.100.nd
Lotus japonicus
chr1.LjT46N10.100.nd
N
0.752
GSMUA_Achr9G01590_001
Musa acuminata
GSMUA_Achr9G01590_001
N
0.749
Ca_17230
Cicer arietinum
Ca_17230
N
0.746
VIT_00s0184g00010
Vitis vinifera
VIT_00s0184g00010
N
0.743
Cucsa.150110
Cucumis sativus
Cucsa.150110
N
0.743
MTR_8g012655
Medicago truncatula
MTR_8g012655
N
0.742
Cla015151
Citrullus lanatus
Cla015151
N
0.737
Cucsa.078000
Cucumis sativus
Cucsa.078000
N
0.737
PK01824.1
Cannabis sativa
PK01824.1
N
0.737
MTR_7g055857
Medicago truncatula
MTR_7g055857
N
0.736
Ca_11707
Cicer arietinum
Ca_11707
N
0.735
chr3.CM0423.200.nd
Lotus japonicus
chr3.CM0423.200.nd
N
0.733
GSMUA_Achr8G00300_001
Musa acuminata
GSMUA_Achr8G00300_001
N
0.732
SELMODRAFT_420254
Selaginella moellendorffii
SELMODRAFT_420254
N
0.729
SELMODRAFT_443366
Selaginella moellendorffii
SELMODRAFT_443366
N
0.729
e_gw1.317.27.1
Physcomitrella patens
e_gw1.317.27.1
N
0.720
AT4G13040
Arabidopsis thaliana
AT4G13040
N
0.715
F775_30629
Aegilops tauschii
F775_30629
N
0.715
TRIUR3_27883
Triticum urartu
TRIUR3_27883
N
0.715
Bo8g033910
Brassica oleracea
Bo8g033910
N
0.709
Bra034895
Brassica rapa
Bra034895
N
0.709
Bostr.2021s0045
Boechera stricta
Bostr.2021s0045
N
0.709
Cagra.2997s0002
Capsella grandiflora
Cagra.2997s0002
N
0.709
Carubv10005663m.g
Capsella rubella
Carubv10005663m.g
N
0.709
Thhalv10026242m.g
Eutrema salsugineum
Thhalv10026242m.g
N
0.709
mgf003727m
Mimulus guttatus
mgf003727m
N
0.706
Bo11579s010
Brassica oleracea
Bo11579s010
N
0.699
Eucgr.K02136
Eucalyptus grandis
Eucgr.K02136
N
0.698
GSMUA_Achr6G06510_001
Musa acuminata
GSMUA_Achr6G06510_001
N
0.697
PDK_20s1512801g001
Phoenix dactylifera
PDK_20s1512801g001
N
0.691
estExt_fgenesh1_pg.C_930051
Physcomitrella patens
estExt_fgenesh1_pg.C_930051
N
0.690
30217.m000254
Ricinus communis
30217.m000254
N
0.677