CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_7g055857
(
Medicago truncatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
MTR_7g055857
T002930_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH22585
AP2
106
154
VSMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Medicago truncatula
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_00s0184g00010
Vitis vinifera
VIT_00s0184g00010
N
0.770
Cucsa.150110
Cucumis sativus
Cucsa.150110
N
0.770
AMTR_s00013p00252260
Amborella trichopoda
AMTR_s00013p00252260
N
0.763
GLYMA18G33460
Glycine max
GLYMA18G33460
N
0.763
cassava6828.valid.m1
Manihot esculenta
cassava6828.valid.m1
N
0.763
Gorai.001G188300
Gossypium raimondii
Gorai.001G188300
N
0.763
MDP0000129941
Malus domestica
MDP0000129941
N
0.763
MDP0000300382
Malus domestica
MDP0000300382
N
0.763
MDP0000675982
Malus domestica
MDP0000675982
N
0.763
chr1.LjT46N10.100.nd
Lotus japonicus
chr1.LjT46N10.100.nd
N
0.763
GLYMA08G46250
Glycine max
GLYMA08G46250
N
0.762
Ca_17230
Cicer arietinum
Ca_17230
N
0.757
Gorai.007G156300
Gossypium raimondii
Gorai.007G156300
N
0.756
Cla002744
Citrullus lanatus
Cla002744
N
0.754
POPTR_0002s24750
Populus trichocarpa
POPTR_0002s24750
N
0.753
PRUPE_ppa011812mg
Prunus persica
PRUPE_ppa011812mg
N
0.753
TCM_002835
Theobroma cacao
TCM_002835
N
0.753
Pm020315
Prunus mume
Pm020315
N
0.753
Ciclev10021891m.g
Citrus clementina
Ciclev10021891m.g
N
0.753
evm.TU.supercontig_21.106
Carica papaya
evm.TU.supercontig_21.106
N
0.753
Gorai.001G105100
Gossypium raimondii
Gorai.001G105100
N
0.753
Gorai.001G231300
Gossypium raimondii
Gorai.001G231300
N
0.753
Lus10011836.g
Linum usitatissimum
Lus10011836.g
N
0.753
Lus10022769.g
Linum usitatissimum
Lus10022769.g
N
0.753
orange1.1g025914m.g
Citrus sinensis
orange1.1g025914m.g
N
0.753
OLONG_009588
Oryza longistaminata
OLONG_009588
N
0.749
ONIVA02G18870
Oryza nivara
ONIVA02G18870
N
0.749
OPUNC02G15530
Oryza punctata
OPUNC02G15530
N
0.749
cassava38073.valid.m1
Manihot esculenta
cassava38073.valid.m1
N
0.747
mgf003491m
Mimulus guttatus
mgf003491m
N
0.747
mgf007349m
Mimulus guttatus
mgf007349m
N
0.747
Cla015151
Citrullus lanatus
Cla015151
N
0.745
Cucsa.078000
Cucumis sativus
Cucsa.078000
N
0.745
chr3.CM0423.200.nd
Lotus japonicus
chr3.CM0423.200.nd
N
0.744
BGIOSGA008254
Oryza indica
BGIOSGA008254
N
0.742
LPERR02G13930
Leersia perrieri
LPERR02G13930
N
0.742
OB02G25330
Oryza brachyantha
OB02G25330
N
0.742
OBART02G17450
Oryza barthii
OBART02G17450
N
0.742
OGLUM02G17700
Oryza glumaepatula
OGLUM02G17700
N
0.742
ORGLA02G0152600
Oryza glaberrima
ORGLA02G0152600
N
0.742
ORUFI02G18290
Oryza rufipogon
ORUFI02G18290
N
0.742
OS02G0499000
Oryza sativa
OS02G0499000
N
0.742
PGSC0003DMG400017485
Solanum tuberosum
PGSC0003DMG400017485
N
0.742
Solyc09g059510.2
Solanum lycopersicum
Solyc09g059510.2
N
0.742
GSMUA_Achr9G01590_001
Musa acuminata
GSMUA_Achr9G01590_001
N
0.738
BRADI3G43822
Brachypodium distachyon
BRADI3G43822
N
0.736
Sb04g020150
Sorghum bicolor
Sb04g020150
N
0.736
Si018306m.g
Setaria italica
Si018306m.g
N
0.736
Traes_6AL_13895C140
Triticum aestivum
Traes_6AL_13895C140
N
0.736
Traes_6DS_43372C0A6
Triticum aestivum
Traes_6DS_43372C0A6
N
0.736
Pavir.Aa01947
Panicum virgatum
Pavir.Aa01947
N
0.736
Pavir.J28064
Panicum virgatum
Pavir.J28064
N
0.736
MTR_8g012655
Medicago truncatula
MTR_8g012655
N
0.734
PK01824.1
Cannabis sativa
PK01824.1
N
0.732
Ca_11707
Cicer arietinum
Ca_11707
N
0.727
GSMUA_Achr8G00300_001
Musa acuminata
GSMUA_Achr8G00300_001
N
0.720
SELMODRAFT_420254
Selaginella moellendorffii
SELMODRAFT_420254
N
0.720
SELMODRAFT_443366
Selaginella moellendorffii
SELMODRAFT_443366
N
0.720
GSMUA_Achr6G06510_001
Musa acuminata
GSMUA_Achr6G06510_001
N
0.717
e_gw1.317.27.1
Physcomitrella patens
e_gw1.317.27.1
N
0.711
Bo11579s010
Brassica oleracea
Bo11579s010
N
0.710
AT4G13040
Arabidopsis thaliana
AT4G13040
N
0.709
Bo8g033910
Brassica oleracea
Bo8g033910
N
0.703
Bra034895
Brassica rapa
Bra034895
N
0.703
Bostr.2021s0045
Boechera stricta
Bostr.2021s0045
N
0.703
Cagra.2997s0002
Capsella grandiflora
Cagra.2997s0002
N
0.703
Carubv10005663m.g
Capsella rubella
Carubv10005663m.g
N
0.703
Thhalv10026242m.g
Eutrema salsugineum
Thhalv10026242m.g
N
0.703
mgf003727m
Mimulus guttatus
mgf003727m
N
0.693
estExt_fgenesh1_pg.C_930051
Physcomitrella patens
estExt_fgenesh1_pg.C_930051
N
0.682
Eucgr.K02136
Eucalyptus grandis
Eucgr.K02136
N
0.682
PDK_20s1512801g001
Phoenix dactylifera
PDK_20s1512801g001
N
0.682