MDP0000162827 (Malus domestica)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 MDP0000162827 T016139_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000162827 ARID/BRIGHT 100 188

Links

Other ARID/BRIGHT family TFs
Other Malus domestica TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30190.m011218 Ricinus communis 30190.m011218 N 0.610
AMTR_s00009p00253500 Amborella trichopoda AMTR_s00009p00253500 N 0.561
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N 0.595
AT1G63490 Arabidopsis thaliana AT1G63490 N 0.612
Bo9g029100 Brassica oleracea Bo9g029100 N 0.531
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N 0.525
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N 0.531
cassava14944.m1 Manihot esculenta cassava14944.m1 N 0.602
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N 0.596
Cla011637 Citrullus lanatus Cla011637 N 0.614
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N 0.552
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N 0.637
GLYMA01G42890 Glycine max GLYMA01G42890 N 0.661
GLYMA11G02580 Glycine max GLYMA11G02580 N 0.639
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N 0.661
GRMZM2G466292 Zea mays GRMZM2G466292 N 0.427
Lus10008495.g Linum usitatissimum Lus10008495.g N 0.567
MDP0000158904 Malus domestica MDP0000158904 N 0.785
MDP0000286412 Malus domestica MDP0000286412 N 0.785
MDP0000287313 Malus domestica MDP0000287313 N 0.681
mgf018831m Mimulus guttatus mgf018831m N 0.500
MTR_5g010300 Medicago truncatula MTR_5g010300 N 0.582
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N 0.585
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N 0.536
PK05702.1 Cannabis sativa PK05702.1 N 0.648
Pm023825 Prunus mume Pm023825 N 0.713
Sb10g031260 Sorghum bicolor Sb10g031260 N 0.427
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N 0.612
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N 0.583
TCM_016246 Theobroma cacao TCM_016246 N 0.683
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N 0.523