CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf018831m
(
Mimulus guttatus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
mgf018831m
T016035_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf018831m
ARID/BRIGHT
177
272
PTKSQAIHQLQARLEYNLFLEDHCGKKAKKRVVFEGEDLDLCKLFNAVKRFGGYDNVVKEKKWAEVFRFVRPGGKISECSKHVLSQLYREHLFDYE
Links
Other
ARID/BRIGHT
family TFs
Other
Mimulus guttatus
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_038_00045
Aquilegia coerulea
Aquca_038_00045
N
0.623
Solyc08g081000.2
Solanum lycopersicum
Solyc08g081000.2
N
0.581
Eucgr.D01851
Eucalyptus grandis
Eucgr.D01851
N
0.576
MDP0000287313
Malus domestica
MDP0000287313
N
0.567
Bo9g029100
Brassica oleracea
Bo9g029100
N
0.559
Cagra.2104s0024
Capsella grandiflora
Cagra.2104s0024
N
0.559
chr2.CM0304.950.nc
Lotus japonicus
chr2.CM0304.950.nc
N
0.559
PK05702.1
Cannabis sativa
PK05702.1
N
0.537
gene32474-v1.0-hybrid
Fragaria vesca
gene32474-v1.0-hybrid
N
0.535
TCM_016246
Theobroma cacao
TCM_016246
N
0.532
Pm023825
Prunus mume
Pm023825
N
0.524
MTR_5g010300
Medicago truncatula
MTR_5g010300
N
0.523
Lus10008495.g
Linum usitatissimum
Lus10008495.g
N
0.523
AT1G63490
Arabidopsis thaliana
AT1G63490
N
0.516
GLYMA01G42890
Glycine max
GLYMA01G42890
N
0.516
GLYMA11G02580
Glycine max
GLYMA11G02580
N
0.516
scaffold_200168.1
Arabidopsis lyrata
scaffold_200168.1
N
0.516
Gorai.004G211700
Gossypium raimondii
Gorai.004G211700
N
0.510
MDP0000158904
Malus domestica
MDP0000158904
N
0.500
MDP0000162827
Malus domestica
MDP0000162827
N
0.500
MDP0000286412
Malus domestica
MDP0000286412
N
0.500
orange1.1g000212m.g
Citrus sinensis
orange1.1g000212m.g
N
0.499
30190.m011218
Ricinus communis
30190.m011218
N
0.494
cassava14944.m1
Manihot esculenta
cassava14944.m1
N
0.494
Cla011637
Citrullus lanatus
Cla011637
N
0.486
Thhalv10023217m.g
Eutrema salsugineum
Thhalv10023217m.g
N
0.477
BRADI1G29247
Brachypodium distachyon
BRADI1G29247
N
0.447
Bostr.9600s0015
Boechera stricta
Bostr.9600s0015
N
0.430