OB01G12610 (Oryza brachyantha)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 OB01G12610 T019884_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB01G12610.1 B3 84 193

Links

Other B3 family TFs
Other Oryza brachyantha TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra009171 Brassica rapa Bra009171 N 0.707
F775_21292 Aegilops tauschii F775_21292 I 0.830
F775_21293 Aegilops tauschii F775_21293 I 0.727
GRMZM2G018336 Zea mays GRMZM2G018336 I 0.710
GRMZM2G065538 Zea mays GRMZM2G065538 I 0.710
mgf023686m Mimulus guttatus mgf023686m I 0.733
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.727
OB01G36520 Oryza brachyantha OB01G36520 I 0.722
OB04G29740 Oryza brachyantha OB04G29740 I 0.764
OB05G32250 Oryza brachyantha OB05G32250 I 0.713
OBART01G02620 Oryza barthii OBART01G02620 I 0.990
OGLUM01G02860 Oryza glumaepatula OGLUM01G02860 I 0.980
OGLUM02G34080 Oryza glumaepatula OGLUM02G34080 N 0.700
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.722
OLONG_010584 Oryza longistaminata OLONG_010584 I 0.766
OMERI11G18880 Oryza meridionalis OMERI11G18880 N 0.817
ONIVA02G36080 Oryza nivara ONIVA02G36080 N 0.827
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.797
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.725
OS02G0764100 Oryza sativa OS02G0764100 N 0.817
Pavir.Ea00485 Panicum virgatum Pavir.Ea00485 I 0.770
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.705
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.743
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.810
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.703
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.703
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.753
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.786
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I 0.772
Traes_3AS_82DEC629B Triticum aestivum Traes_3AS_82DEC629B N 0.750
Traes_3DS_CC9498D91 Triticum aestivum Traes_3DS_CC9498D91 N 0.767
Traes_4BL_F6827247E Triticum aestivum Traes_4BL_F6827247E N 0.725
Traes_4DL_59B1C9052 Triticum aestivum Traes_4DL_59B1C9052 I 0.780
Traes_4DL_872A1302F Triticum aestivum Traes_4DL_872A1302F I 0.727
TRIUR3_24850 Triticum urartu TRIUR3_24850 I 0.790
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.729