Lus10024320.g (Linum usitatissimum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Lus10024320.g T023515_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.857 0.857
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10024320 B3 156 258

Links

Other B3 family TFs
Other Linum usitatissimum TFs

524 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28152.m000905 Ricinus communis 28152.m000905 N
29661.m000902 Ricinus communis 29661.m000902 N
30170.m013752 Ricinus communis 30170.m013752 N
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N
LBD38 Arabidopsis thaliana AT3G49940 N
LBD39 Arabidopsis thaliana AT4G37540 N
LBD37 Arabidopsis thaliana AT5G67420 N
BGIOSGA010454 Oryza indica BGIOSGA010454 N
Bo1g003550 Brassica oleracea Bo1g003550 N
Bo2g168020 Brassica oleracea Bo2g168020 N
Bo5g132850 Brassica oleracea Bo5g132850 N
Bo7g063630 Brassica oleracea Bo7g063630 N
Bo7g099150 Brassica oleracea Bo7g099150 N
Bo7g118580 Brassica oleracea Bo7g118580 N
Bo8g079200 Brassica oleracea Bo8g079200 N
Bo9g018500 Brassica oleracea Bo9g018500 N
Bo9g019150 Brassica oleracea Bo9g019150 N
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N
Bra011772 Brassica rapa Bra011772 N
Bra012164 Brassica rapa Bra012164 N
Bra012913 Brassica rapa Bra012913 N
Bra017831 Brassica rapa Bra017831 N
Bra031833 Brassica rapa Bra031833 N
Bra036040 Brassica rapa Bra036040 N
Bra037847 Brassica rapa Bra037847 N
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N
Carubv10005616m.g Capsella rubella Carubv10005616m.g N
Carubv10017944m.g Capsella rubella Carubv10017944m.g N
Carubv10027507m.g Capsella rubella Carubv10027507m.g N
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N
cassava9459.m1 Manihot esculenta cassava9459.m1 N
Ca_02208 Cicer arietinum Ca_02208 N
Ca_09342 Cicer arietinum Ca_09342 N
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N
chr5.CM0200.600.nd Lotus japonicus chr5.CM0200.600.nd N
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N
Cla014228 Citrullus lanatus Cla014228 N
Cla020920 Citrullus lanatus Cla020920 N
Cucsa.103050 Cucumis sativus Cucsa.103050 N
Cucsa.352730 Cucumis sativus Cucsa.352730 N
Eucgr.F00115 Eucalyptus grandis Eucgr.F00115 N
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N
GLYMA01G40010 Glycine max GLYMA01G40010 N
GLYMA05G22120 Glycine max GLYMA05G22120 N
GLYMA10G40421 Glycine max GLYMA10G40421 N
GLYMA11G05280 Glycine max GLYMA11G05280 N
GLYMA14G09750 Glycine max GLYMA14G09750 N
GLYMA17G17540 Glycine max GLYMA17G17540 N
GLYMA20G26910 Glycine max GLYMA20G26910 N
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N
GRMZM2G044902 Zea mays GRMZM2G044902 N
GSMUA_Achr2G13440_001 Musa acuminata GSMUA_Achr2G13440_001 N
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N
GSMUA_Achr4G32550_001 Musa acuminata GSMUA_Achr4G32550_001 N
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N
LjSGA_036652.1 Lotus japonicus LjSGA_036652.1 N
LPERR03G19360 Leersia perrieri LPERR03G19360 N
Lus10007758.g Linum usitatissimum Lus10007758.g N
Lus10011530.g Linum usitatissimum Lus10011530.g N
Lus10018697.g Linum usitatissimum Lus10018697.g N
Lus10019292.g Linum usitatissimum Lus10019292.g N
MDP0000139025 Malus domestica MDP0000139025 N
MDP0000151330 Malus domestica MDP0000151330 N
MDP0000239820 Malus domestica MDP0000239820 N
MDP0000247079 Malus domestica MDP0000247079 N
MDP0000261146 Malus domestica MDP0000261146 N
MDP0000487015 Malus domestica MDP0000487015 N
MDP0000747679 Malus domestica MDP0000747679 N
MDP0000794101 Malus domestica MDP0000794101 N
mgf007319m Mimulus guttatus mgf007319m N
mgf016023m Mimulus guttatus mgf016023m N
mgf016064m Mimulus guttatus mgf016064m N
MTR_1g106420 Medicago truncatula MTR_1g106420 N
MTR_4g095600 Medicago truncatula MTR_4g095600 N
MTR_5g015880 Medicago truncatula MTR_5g015880 N
OB03G31560 Oryza brachyantha OB03G31560 N
OBART03G22820 Oryza barthii OBART03G22820 N
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N
OLONG_015384 Oryza longistaminata OLONG_015384 N
OMERI03G20600 Oryza meridionalis OMERI03G20600 N
ONIVA03G24370 Oryza nivara ONIVA03G24370 N
OPUNC03G21330 Oryza punctata OPUNC03G21330 N
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N
OS03G0445700 Oryza sativa OS03G0445700 N
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N
Pavir.J18418 Panicum virgatum Pavir.J18418 N
PGSC0003DMG400021509 Solanum tuberosum PGSC0003DMG400021509 N
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N
PK03075.1 Cannabis sativa PK03075.1 N
PK03977.1 Cannabis sativa PK03977.1 N
PK15647.1 Cannabis sativa PK15647.1 N
Pm005389 Prunus mume Pm005389 N
Pm021281 Prunus mume Pm021281 N
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N
Sb01g031790 Sorghum bicolor Sb01g031790 N
LBD38 Arabidopsis lyrata scaffold_502015.1 N
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N
SELMODRAFT_61520 Selaginella moellendorffii SELMODRAFT_61520 N
Si031011m.g Setaria italica Si031011m.g N
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N
Solyc04g077990.2 Solanum lycopersicum Solyc04g077990.2 N
TCM_000766 Theobroma cacao TCM_000766 N
TCM_007211 Theobroma cacao TCM_007211 N
TCM_034722 Theobroma cacao TCM_034722 N
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N