ENSAMXG00000020366 (Astyanax mexicanus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSAMXG00000020366 T032940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.963
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.963
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.963
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.963
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.963
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.963
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.963
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 0.944
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 0.944
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 0.944
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 0.944
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 0.944
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 0.944
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 0.944
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 0.944
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 0.944
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 0.944
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 0.944
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 0.944
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 0.944
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 0.944
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000020970 bHLH 46 100

Links

Other bHLH family TFs
Other Astyanax mexicanus TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30024.m001687 Ricinus communis 30024.m001687 N 0.000
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.000
Ca_03992 Cicer arietinum Ca_03992 N 0.000
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N 0.000
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.000
fgenesh1_pg.C_scaffold_2000886 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000886 I 0.000
fgenesh1_pg.C_scaffold_8002648 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002648 I 0.000
GLYMA06G13530 Glycine max GLYMA06G13530 N 0.000
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.000
Gorai.006G266900 Gossypium raimondii Gorai.006G266900 I 0.000
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.000
MDP0000141137 Malus domestica MDP0000141137 N 0.000
MDP0000819497 Malus domestica MDP0000819497 N 0.000
mgf025545m Mimulus guttatus mgf025545m N 0.000
orange1.1g036926m.g Citrus sinensis orange1.1g036926m.g I 0.000
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.000
Pm019768 Prunus mume Pm019768 N 0.000
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N 0.000
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.000
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.000
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N 0.000
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N 0.000
scaffold_103100001.1 Arabidopsis lyrata scaffold_103100001.1 I 0.000
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.000
TCM_015430 Theobroma cacao TCM_015430 N 0.000
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.000