ENSLOCG00000006013 (Lepisosteus oculatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLOCG00000006013 T035017_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf3
M09465_2.00 		Mus musculus
ABWTCAAAGS
SCTTTGAWVT		 Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724 		0.914 0.923
Tcf3
M09466_2.00 		Mus musculus
VCAGCTGBNN
NNVCAGCTGB		 Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978 		0.914 0.923
Tcf3
M09886_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E47_05 		0.914 0.923
TCF3
M02775_2.00 		Homo sapiens
NVCACCTGBN
NVCAGGTGBN		 SELEX
Jolma et al.(2013)
TCF3_1 		0.886 0.923
TCF3
M08710_2.00 		Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB		 Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A 		0.886 0.923
TCF3
M09791_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E12_Q6 		0.886 0.923
TCF3
M09792_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_01 		0.886 0.923
TCF3
M09793_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$E2A_Q6_02 		0.886 0.923
TCF3
M09794_2.00 		Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB		 Transfac
Matys et al.(2006)
V$E47_01 		0.886 0.923
TCF3
M09795_2.00 		Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN		 Transfac
Matys et al.(2006)
V$E47_02 		0.886 0.923
Tcf12
M01740_2.00 		Mus musculus
NVCAYCTGB
VCAGRTGBN		 PBM
Weirauch et al.(2014)
pTH5071 		0.886 0.885
TCF12
M04137_2.00 		Homo sapiens
VCACSTGB
VCASGTGB		 SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX 		0.886 0.885
Tcf12
M08062_2.00 		Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY		 ChIP-seq
Mathelier et al.(2014)
MA0521.1 		0.886 0.885
TCF12
M07805_2.00 		Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN		 ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha 		0.886 0.885
TCF12
M07806_2.00 		Homo sapiens
VCASCTGB
VCAGSTGB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha 		0.886 0.885
TCF12
M08731_2.00 		Homo sapiens
CMCASCTGSH
DSCAGSTGKG		 Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A 		0.886 0.885
Tcf12
M08762_2.00 		Mus musculus
VMCASCTGSH
DSCAGSTGKB		 Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A 		0.886 0.885
TCF12
M09458_2.00 		Homo sapiens
NNVCAGCTGB
VCAGCTGBNN		 Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465 		0.886 0.885
TCF12
M09858_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HEB_Q6 		0.886 0.885
TCF12
M09859_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HTF4_Q2 		0.886 0.885
TCF12
M09860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_01 		0.886 0.885
TCF12
M09861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_03 		0.886 0.885
TCF12
M09862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF12_05 		0.886 0.885
TCF12
M04138_2.00 		Homo sapiens
NCAYCTGN
NCAGRTGN		 SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX 		0.886 0.885
Tcf3
M00753_2.00 		Mus musculus
VCACCTGBN
NVCAGGTGB		 PBM
Weirauch et al.(2013)
pTH3866 		0.886 0.846
Tcf3
M01723_2.00 		Mus musculus
NNVCACSTGB
VCASGTGBNN		 PBM
Weirauch et al.(2014)
pTH4580 		0.886 0.846
Tcf3
M00118_2.00 		Mus musculus
VCAYCTGB
VCAGRTGB		 PBM
Badis et al.(2009)
Tcfe2a_3865 		0.886 0.846
Tcf4
M01750_2.00 		Mus musculus
VCAGVTGBN
NVCABCTGB		 PBM
Weirauch et al.(2014)
pTH5101 		0.884 0.885
TCF4
M02807_2.00 		Homo sapiens
HRCACCTGBN
NVCAGGTGYD		 SELEX
Jolma et al.(2013)
TCF4_1 		0.884 0.885
TCF4
M02808_2.00 		Homo sapiens
NVCACCTBBN
NVVAGGTGBN		 SELEX
Jolma et al.(2013)
TCF4_2 		0.884 0.885
TCF4
M02728_2.00 		Homo sapiens
RCACCTG
CAGGTGY		 SELEX
Jolma et al.(2010)
TCF4_dimer 		0.884 0.885
TCF4
M04214_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX 		0.884 0.885
Tcf4
M08775_2.00 		Mus musculus
HRCACCTGB
VCAGGTGYD		 Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B 		0.884 0.885
TCF4
M09461_2.00 		Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST		 Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054 		0.884 0.885
TCF4
M04215_2.00 		Homo sapiens
VCACCTGN
NCAGGTGB		 SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX 		0.884 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000007277 bHLH 568 621

Links

Other bHLH family TFs
Other Lepisosteus oculatus TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004471 Ricinus communis 30076.m004471 I 0.000
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.000
NGA3 Arabidopsis thaliana AT1G01030 N 0.000
NGA4 Arabidopsis thaliana AT4G01500 D 0.000
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.000
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.000
Bo00853s090 Brassica oleracea Bo00853s090 I 0.000
Bo3g001110 Brassica oleracea Bo3g001110 N 0.000
Bo4g099000 Brassica oleracea Bo4g099000 N 0.000
Bo4g197410 Brassica oleracea Bo4g197410 I 0.000
Bo8g097490 Brassica oleracea Bo8g097490 N 0.000
Bo9g004050 Brassica oleracea Bo9g004050 N 0.000
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.000
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.000
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I 0.000
Bra000434 Brassica rapa Bra000434 N 0.000
Bra007646 Brassica rapa Bra007646 N 0.000
Bra008552 Brassica rapa Bra008552 I 0.000
Bra033294 Brassica rapa Bra033294 N 0.000
Bra037417 Brassica rapa Bra037417 N 0.000
Bra040478 Brassica rapa Bra040478 I 0.000
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.000
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.000
Cagra.23502s0003 Capsella grandiflora Cagra.23502s0003 I 0.000
Carubv10001406m.g Capsella rubella Carubv10001406m.g I 0.000
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.000
Ca_01368 Cicer arietinum Ca_01368 I 0.000
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.000
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.000
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.000
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.000
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.000
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.000
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.000
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.000
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.000
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.000
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.000
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.000
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.000
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.000
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.000
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.000
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.000
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.000
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.000
MDP0000288808 Malus domestica MDP0000288808 N 0.000
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.000
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.000
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.000
OB03G11610 Oryza brachyantha OB03G11610 N 0.000
OBART04G22880 Oryza barthii OBART04G22880 I 0.000
OBART10G17010 Oryza barthii OBART10G17010 N 0.000
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.000
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.000
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.000
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.000
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.000
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.000
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.000
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.000
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.000
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.000
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.000
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.000
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.000
OS04G0581400 Oryza sativa OS04G0581400 I 0.000
OS10G0537100 Oryza sativa OS10G0537100 N 0.000
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.000
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.000
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.000
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.000
PK21157.1 Cannabis sativa PK21157.1 I 0.000
Pm024248 Prunus mume Pm024248 I 0.000
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.000
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.000
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.000
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.000
Si036864m.g Setaria italica Si036864m.g N 0.000
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.000
TCM_005014 Theobroma cacao TCM_005014 I 0.000
TCM_015590 Theobroma cacao TCM_015590 I 0.000
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.000
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.000
Thhalv10028783m.g Eutrema salsugineum Thhalv10028783m.g I 0.000
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.000
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.000
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.000
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.000
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.000
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.000