CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MAX
(
Oryzias latipes
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSORLG00000016817
T036470_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MAX
M00938_2.00
Homo sapiens
CCACGTGH
DCACGTGG
PBM
Guo et al.(2014)
Max_L
0.884
0.962
Max
M00121_2.00
Mus musculus
NCRCRTGNN
NNCAYGYGN
PBM
Badis et al.(2009)
Max_3863
0.884
0.962
Max
M00122_2.00
Mus musculus
NNCRCRTGN
NCAYGYGNN
PBM
Badis et al.(2009)
Max_3864
0.884
0.962
Max
M01753_2.00
Mus musculus
NCAYGYKNN
NNMRCRTGN
PBM
Weirauch et al.(2014)
pTH4381
0.884
0.962
Max
M08778_2.00
Mus musculus
VVVCACGYGSN
NSCRCGTGBBB
Misc
Kulakovskiy et al.(2013)
MAX_MOUSE.H11MO.0.A
0.884
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000021041
bHLH
24
75
KRAHHNALERKRRDHIKDSFHSLRDSVPALQGEKASRAQILDKATEYIQFMR
ENSORLP00000021042
bHLH
15
66
KRAHHNALERKRRDHIKDSFHSLRDSVPALQGEKASRAQILDKATEYIQFMR
Links
Other
bHLH
family TFs
Other
Oryzias latipes
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30138.m004071
Ricinus communis
30138.m004071
I
0.000
AMTR_s00057p00091350
Amborella trichopoda
AMTR_s00057p00091350
I
0.000
RKD1
Arabidopsis thaliana
AT1G18790
I
0.000
RKD2
Arabidopsis thaliana
AT1G74480
D
0.000
RKD3
Arabidopsis thaliana
AT5G66990
N
0.000
BGIOSGA022580
Oryza indica
BGIOSGA022580
I
0.000
Bo7g064180
Brassica oleracea
Bo7g064180
I
0.000
Bostr.0568s0123
Boechera stricta
Bostr.0568s0123
N
0.000
Bostr.3288s0094
Boechera stricta
Bostr.3288s0094
I
0.000
Bra008153
Brassica rapa
Bra008153
I
0.000
Bra012122
Brassica rapa
Bra012122
I
0.000
Bra015907
Brassica rapa
Bra015907
I
0.000
Bra037130
Brassica rapa
Bra037130
N
0.000
Cagra.0402s0077
Capsella grandiflora
Cagra.0402s0077
I
0.000
Cagra.2007s0003
Capsella grandiflora
Cagra.2007s0003
N
0.000
Cagra.4153s0001
Capsella grandiflora
Cagra.4153s0001
I
0.000
Carubv10011133m.g
Capsella rubella
Carubv10011133m.g
I
0.000
Carubv10021541m.g
Capsella rubella
Carubv10021541m.g
I
0.000
Carubv10027579m.g
Capsella rubella
Carubv10027579m.g
N
0.000
cassava35166.m1
Manihot esculenta
cassava35166.m1
I
0.000
Ca_13151
Cicer arietinum
Ca_13151
I
0.000
Ca_27191
Cicer arietinum
Ca_27191
I
0.000
chr4.CM0087.990.nc
Lotus japonicus
chr4.CM0087.990.nc
I
0.000
Cla019404
Citrullus lanatus
Cla019404
I
0.000
Cucsa.197700
Cucumis sativus
Cucsa.197700
I
0.000
evm.TU.supercontig_423.7
Carica papaya
evm.TU.supercontig_423.7
I
0.000
F775_07483
Aegilops tauschii
F775_07483
I
0.000
fgenesh1_pg.C_scaffold_2000886
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000886
I
0.000
fgenesh1_pg.C_scaffold_2001738
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001738
I
0.000
fgenesh1_pg.C_scaffold_8002648
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002648
I
0.000
fgenesh2_kg.1__2057__AT1G18790.1
Arabidopsis lyrata
fgenesh2_kg.1__2057__AT1G18790.1
I
0.000
gene12898-v1.0-hybrid
Fragaria vesca
gene12898-v1.0-hybrid
N
0.000
gene26015-v1.0-hybrid
Fragaria vesca
gene26015-v1.0-hybrid
I
0.000
GLYMA04G33516
Glycine max
GLYMA04G33516
I
0.000
GLYMA05G01030
Glycine max
GLYMA05G01030
I
0.000
GLYMA06G20881
Glycine max
GLYMA06G20881
I
0.000
GLYMA17G10866
Glycine max
GLYMA17G10866
I
0.000
Gorai.008G193400
Gossypium raimondii
Gorai.008G193400
I
0.000
GRMZM2G392306
Zea mays
GRMZM2G392306
I
0.000
GSMUA_AchrUn_randomG11290_001
Musa acuminata
GSMUA_AchrUn_randomG11290_001
N
0.000
LPERR06G07570
Leersia perrieri
LPERR06G07570
I
0.000
Lus10019100.g
Linum usitatissimum
Lus10019100.g
I
0.000
Lus10034456.g
Linum usitatissimum
Lus10034456.g
I
0.000
MDP0000261199
Malus domestica
MDP0000261199
I
0.000
MDP0000266172
Malus domestica
MDP0000266172
I
0.000
mg020279m
Mimulus guttatus
mg020279m
I
0.000
mgf022310m
Mimulus guttatus
mgf022310m
I
0.000
MLOC_12609
Hordeum vulgare
MLOC_12609
I
0.000
MLOC_59560
Hordeum vulgare
MLOC_59560
I
0.000
MTR_3g435550
Medicago truncatula
MTR_3g435550
I
0.000
OB06G17750
Oryza brachyantha
OB06G17750
I
0.000
OMERI06G09770
Oryza meridionalis
OMERI06G09770
I
0.000
ONIVA06G09450
Oryza nivara
ONIVA06G09450
I
0.000
OPUNC06G07940
Oryza punctata
OPUNC06G07940
I
0.000
orange1.1g036926m.g
Citrus sinensis
orange1.1g036926m.g
I
0.000
ORGLA06G0077700
Oryza glaberrima
ORGLA06G0077700
I
0.000
ORUFI06G08510
Oryza rufipogon
ORUFI06G08510
I
0.000
OS06G0228950
Oryza sativa
OS06G0228950
I
0.000
Pavir.Da01160
Panicum virgatum
Pavir.Da01160
I
0.000
Pavir.J13146
Panicum virgatum
Pavir.J13146
I
0.000
PDK_20s1383532g001
Phoenix dactylifera
PDK_20s1383532g001
I
0.000
PGSC0003DMG400018531
Solanum tuberosum
PGSC0003DMG400018531
N
0.000
Pm024905
Prunus mume
Pm024905
I
0.000
PRUPE_ppa023107mg
Prunus persica
PRUPE_ppa023107mg
I
0.000
Sb10g008120
Sorghum bicolor
Sb10g008120
I
0.000
scaffold_103100001.1
Arabidopsis lyrata
scaffold_103100001.1
I
0.000
SELMODRAFT_73109
Selaginella moellendorffii
SELMODRAFT_73109
N
0.000
SELMODRAFT_73110
Selaginella moellendorffii
SELMODRAFT_73110
N
0.000
Si008273m.g
Setaria italica
Si008273m.g
I
0.000
Solyc03g083040.1
Solanum lycopersicum
Solyc03g083040.1
N
0.000
Solyc03g116010.1
Solanum lycopersicum
Solyc03g116010.1
I
0.000
TCM_014009
Theobroma cacao
TCM_014009
I
0.000
Thhalv10005560m.g
Eutrema salsugineum
Thhalv10005560m.g
N
0.000
Thhalv10019554m.g
Eutrema salsugineum
Thhalv10019554m.g
I
0.000
Traes_7DS_405F08A53
Triticum aestivum
Traes_7DS_405F08A53
I
0.000
TRIUR3_19503
Triticum urartu
TRIUR3_19503
I
0.000
VIT_17s0000g06250
Vitis vinifera
VIT_17s0000g06250
I
0.000