CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10015932
(
Chelonia mydas
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cmyd_10015932
T047110_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10015932
bHLH
20
76
NKLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPNSKLEKADILEMTVSYLKQQS
Links
Other
bHLH
family TFs
Other
Chelonia mydas
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29801.m003096
Ricinus communis
29801.m003096
I
29814.m000736
Ricinus communis
29814.m000736
I
29970.m000987
Ricinus communis
29970.m000987
I
30170.m013698
Ricinus communis
30170.m013698
I
30170.m013927
Ricinus communis
30170.m013927
I
MYB25
Arabidopsis lyrata
Al_scaffold_0004_2572
I
AMTR_s00006p00225600
Amborella trichopoda
AMTR_s00006p00225600
I
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
Aquca_007_00776
Aquilegia coerulea
Aquca_007_00776
I
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
AtMYB70
Arabidopsis thaliana
AT2G23290
D
F3A4.140
Arabidopsis thaliana
AT3G50060
D
MYB109
Arabidopsis thaliana
AT3G55730
I
MYB73
Arabidopsis thaliana
AT4G37260
D
MYB44
Arabidopsis thaliana
AT5G67300
D
BGIOSGA000485
Oryza indica
BGIOSGA000485
I
BGIOSGA018238
Oryza indica
BGIOSGA018238
I
BGIOSGA018239
Oryza indica
BGIOSGA018239
I
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
Bo1g004900
Brassica oleracea
Bo1g004900
I
Bo1g082480
Brassica oleracea
Bo1g082480
I
Bo2g167960
Brassica oleracea
Bo2g167960
I
Bo3g153550
Brassica oleracea
Bo3g153550
I
Bo4g151410
Brassica oleracea
Bo4g151410
I
Bo7g063830
Brassica oleracea
Bo7g063830
I
Bo7g099180
Brassica oleracea
Bo7g099180
I
Bo7g118450
Brassica oleracea
Bo7g118450
I
Bo8g079430
Brassica oleracea
Bo8g079430
I
Bo8g090160
Brassica oleracea
Bo8g090160
I
Bostr.0568s0154
Boechera stricta
Bostr.0568s0154
I
Bostr.20505s0177
Boechera stricta
Bostr.20505s0177
I
Bostr.22252s0145
Boechera stricta
Bostr.22252s0145
I
Bostr.23794s0078
Boechera stricta
Bostr.23794s0078
I
Bostr.27895s0157
Boechera stricta
Bostr.27895s0157
I
Bostr.6864s0236
Boechera stricta
Bostr.6864s0236
I
Bostr.7867s1585
Boechera stricta
Bostr.7867s1585
I
Bra007186
Brassica rapa
Bra007186
I
Bra010593
Brassica rapa
Bra010593
I
Bra011749
Brassica rapa
Bra011749
I
Bra012149
Brassica rapa
Bra012149
I
Bra012910
Brassica rapa
Bra012910
I
Bra017813
Brassica rapa
Bra017813
I
Bra029990
Brassica rapa
Bra029990
I
Bra032176
Brassica rapa
Bra032176
I
Bra036048
Brassica rapa
Bra036048
I
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
Cagra.0342s0017
Capsella grandiflora
Cagra.0342s0017
I
Cagra.10445s0001
Capsella grandiflora
Cagra.10445s0001
I
Cagra.1232s0025
Capsella grandiflora
Cagra.1232s0025
I
Carubv10007638m.g
Capsella rubella
Carubv10007638m.g
I
Carubv10019440m.g
Capsella rubella
Carubv10019440m.g
I
Carubv10023414m.g
Capsella rubella
Carubv10023414m.g
I
Carubv10023692m.g
Capsella rubella
Carubv10023692m.g
I
Carubv10027659m.g
Capsella rubella
Carubv10027659m.g
I
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
cassava2215.valid.m1
Manihot esculenta
cassava2215.valid.m1
I
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
cassava43120.valid.m1
Manihot esculenta
cassava43120.valid.m1
I
cassava46434.m1
Manihot esculenta
cassava46434.m1
I
cassava47374.m1
Manihot esculenta
cassava47374.m1
I
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
Ca_01522
Cicer arietinum
Ca_01522
I
Ca_02182
Cicer arietinum
Ca_02182
I
Ca_12468
Cicer arietinum
Ca_12468
I
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
chr2.CM0250.240.nd
Lotus japonicus
chr2.CM0250.240.nd
I
chr5.CM0096.100.nc
Lotus japonicus
chr5.CM0096.100.nc
I
Ciclev10001979m.g
Citrus clementina
Ciclev10001979m.g
I
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
Ciclev10026107m.g
Citrus clementina
Ciclev10026107m.g
I
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
Cla006872
Citrullus lanatus
Cla006872
I
Cla014191
Citrullus lanatus
Cla014191
I
Cla020946
Citrullus lanatus
Cla020946
I
Cla021015
Citrullus lanatus
Cla021015
I
Cla022947
Citrullus lanatus
Cla022947
I
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
Cucsa.073130
Cucumis sativus
Cucsa.073130
I
Cucsa.102710
Cucumis sativus
Cucsa.102710
I
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
Cucsa.352560
Cucumis sativus
Cucsa.352560
I
Cucsa.395890
Cucumis sativus
Cucsa.395890
I
Eucgr.F00002
Eucalyptus grandis
Eucgr.F00002
I
Eucgr.H02226
Eucalyptus grandis
Eucgr.H02226
I
Eucgr.J00189
Eucalyptus grandis
Eucgr.J00189
I
Eucgr.K03010
Eucalyptus grandis
Eucgr.K03010
I
evm.TU.supercontig_21.145
Carica papaya
evm.TU.supercontig_21.145
I
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
evm.TU.supercontig_6.98
Carica papaya
evm.TU.supercontig_6.98
I
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
AtMYB70
Arabidopsis lyrata
fgenesh2_kg.4__260__AT2G23290.1
I
MYB77
Arabidopsis lyrata
fgenesh2_kg.5__1356__AT3G50060.1
I
gene00185-v1.0-hybrid
Fragaria vesca
gene00185-v1.0-hybrid
I
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
gene24027-v1.0-hybrid
Fragaria vesca
gene24027-v1.0-hybrid
I
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
GLYMA01G39740
Glycine max
GLYMA01G39740
I
GLYMA04G03910
Glycine max
GLYMA04G03910
I
GLYMA04G04490
Glycine max
GLYMA04G04490
I
GLYMA05G21220
Glycine max
GLYMA05G21220
I
GLYMA06G04010
Glycine max
GLYMA06G04010
I
GLYMA11G05550
Glycine max
GLYMA11G05550
I
GLYMA14G09540
Glycine max
GLYMA14G09540
I
GLYMA17G35620
Glycine max
GLYMA17G35620
I
Gorai.002G009300
Gossypium raimondii
Gorai.002G009300
I
Gorai.005G234900
Gossypium raimondii
Gorai.005G234900
I
Gorai.007G055600
Gossypium raimondii
Gorai.007G055600
I
Gorai.007G218100
Gossypium raimondii
Gorai.007G218100
I
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
Gorai.009G215900
Gossypium raimondii
Gorai.009G215900
I
Gorai.009G275100
Gossypium raimondii
Gorai.009G275100
I
Gorai.009G276400
Gossypium raimondii
Gorai.009G276400
I
Gorai.010G023500
Gossypium raimondii
Gorai.010G023500
I
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
GRMZM2G050550
Zea mays
GRMZM2G050550
I
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
GSMUA_Achr4G12950_001
Musa acuminata
GSMUA_Achr4G12950_001
I
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
GSMUA_Achr8G25220_001
Musa acuminata
GSMUA_Achr8G25220_001
I
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
LPERR01G32110
Leersia perrieri
LPERR01G32110
I
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
Lus10010238.g
Linum usitatissimum
Lus10010238.g
I
Lus10010260.g
Linum usitatissimum
Lus10010260.g
I
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
Lus10030336.g
Linum usitatissimum
Lus10030336.g
I
Lus10032764.g
Linum usitatissimum
Lus10032764.g
I
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
MDP0000187872
Malus domestica
MDP0000187872
I
MDP0000196986
Malus domestica
MDP0000196986
I
MDP0000232454
Malus domestica
MDP0000232454
I
MDP0000275800
Malus domestica
MDP0000275800
I
MDP0000463846
Malus domestica
MDP0000463846
I
MDP0000477900
Malus domestica
MDP0000477900
I
MDP0000480596
Malus domestica
MDP0000480596
I
MDP0000641708
Malus domestica
MDP0000641708
I
MDP0000784297
Malus domestica
MDP0000784297
I
MDP0000823270
Malus domestica
MDP0000823270
I
MDP0000894463
Malus domestica
MDP0000894463
I
mgf002573m
Mimulus guttatus
mgf002573m
I
mgf014089m
Mimulus guttatus
mgf014089m
I
mgf023922m
Mimulus guttatus
mgf023922m
I
mgf025567m
Mimulus guttatus
mgf025567m
I
MLOC_64817
Hordeum vulgare
MLOC_64817
I
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
MTR_5g016510
Medicago truncatula
MTR_5g016510
I
OB01G46120
Oryza brachyantha
OB01G46120
I
OB09G10200
Oryza brachyantha
OB09G10200
I
OBART01G37390
Oryza barthii
OBART01G37390
I
OBART09G00310
Oryza barthii
OBART09G00310
I
OGLUM01G41330
Oryza glumaepatula
OGLUM01G41330
I
OGLUM05G13590
Oryza glumaepatula
OGLUM05G13590
I
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
OLONG_001357
Oryza longistaminata
OLONG_001357
I
OMERI01G34370
Oryza meridionalis
OMERI01G34370
I
OMERI05G11510
Oryza meridionalis
OMERI05G11510
I
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
ONIVA01G42300
Oryza nivara
ONIVA01G42300
I
ONIVA05G13470
Oryza nivara
ONIVA05G13470
I
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
OPUNC01G36300
Oryza punctata
OPUNC01G36300
I
OPUNC05G11020
Oryza punctata
OPUNC05G11020
I
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
orange1.1g021071m.g
Citrus sinensis
orange1.1g021071m.g
I
orange1.1g022144m.g
Citrus sinensis
orange1.1g022144m.g
I
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
ORGLA01G0312200
Oryza glaberrima
ORGLA01G0312200
I
ORGLA05G0109400
Oryza glaberrima
ORGLA05G0109400
I
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
ORUFI01G40770
Oryza rufipogon
ORUFI01G40770
I
ORUFI05G13850
Oryza rufipogon
ORUFI05G13850
I
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
OS01G0850400
Oryza sativa
OS01G0850400
I
OS09G0106700
Oryza sativa
OS09G0106700
I
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
PGSC0003DMG400003316
Solanum tuberosum
PGSC0003DMG400003316
I
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
PGSC0003DMG400024983
Solanum tuberosum
PGSC0003DMG400024983
I
PK16550.1
Cannabis sativa
PK16550.1
I
PK17282.1
Cannabis sativa
PK17282.1
I
PK28565.1
Cannabis sativa
PK28565.1
D
Pm005220
Prunus mume
Pm005220
I
Pm005332
Prunus mume
Pm005332
I
Pm021211
Prunus mume
Pm021211
I
POPTR_0002s12410
Populus trichocarpa
POPTR_0002s12410
I
POPTR_0002s13030
Populus trichocarpa
POPTR_0002s13030
I
POPTR_0005s18620
Populus trichocarpa
POPTR_0005s18620
I
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
POPTR_0009s09890
Populus trichocarpa
POPTR_0009s09890
I
POPTR_0014s02260
Populus trichocarpa
POPTR_0014s02260
I
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
PRUPE_ppa008450mg
Prunus persica
PRUPE_ppa008450mg
I
PRUPE_ppa008979mg
Prunus persica
PRUPE_ppa008979mg
I
PRUPE_ppa010735mg
Prunus persica
PRUPE_ppa010735mg
I
PRUPE_ppa023154mg
Prunus persica
PRUPE_ppa023154mg
I
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
SapurV1A.0167s0310
Salix purpurea
SapurV1A.0167s0310
I
SapurV1A.0339s0020
Salix purpurea
SapurV1A.0339s0020
I
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
SapurV1A.0708s0130
Salix purpurea
SapurV1A.0708s0130
I
SapurV1A.0919s0160
Salix purpurea
SapurV1A.0919s0160
I
SapurV1A.1934s0020
Salix purpurea
SapurV1A.1934s0020
I
Sb02g013010
Sorghum bicolor
Sb02g013010
I
ATMYBR1
Arabidopsis lyrata
scaffold_803378.1
I
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
Si032789m.g
Setaria italica
Si032789m.g
I
Solyc02g092930.1
Solanum lycopersicum
Solyc02g092930.1
I
Solyc04g078420.1
Solanum lycopersicum
Solyc04g078420.1
I
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
TCM_000696
Theobroma cacao
TCM_000696
I
TCM_007138
Theobroma cacao
TCM_007138
I
TCM_042474
Theobroma cacao
TCM_042474
I
Thhalv10000438m.g
Eutrema salsugineum
Thhalv10000438m.g
I
Thhalv10004676m.g
Eutrema salsugineum
Thhalv10004676m.g
I
Thhalv10010431m.g
Eutrema salsugineum
Thhalv10010431m.g
I
Thhalv10010581m.g
Eutrema salsugineum
Thhalv10010581m.g
I
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
Thhalv10025742m.g
Eutrema salsugineum
Thhalv10025742m.g
I
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
VIT_07s0129g01050
Vitis vinifera
VIT_07s0129g01050
I
VIT_13s0067g01360
Vitis vinifera
VIT_13s0067g01360
I
VIT_18s0001g09850
Vitis vinifera
VIT_18s0001g09850
I