fgenesh2_pg.scaffold_9000228 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 fgenesh2_pg.scaffold_9000228 T048612_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_9000228 bHLH 136 188

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I
GL1 Arabidopsis thaliana AT3G27920 I
WER Arabidopsis thaliana AT5G14750 D
MYB23 Arabidopsis thaliana AT5G40330 D
Bo2g012170 Brassica oleracea Bo2g012170 I
Bo7g090950 Brassica oleracea Bo7g090950 I
Bo9g165670 Brassica oleracea Bo9g165670 I
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I
Bra008740 Brassica rapa Bra008740 I
Bra023486 Brassica rapa Bra023486 I
Bra025311 Brassica rapa Bra025311 I
Bra025589 Brassica rapa Bra025589 I
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I
Carubv10001990m.g Capsella rubella Carubv10001990m.g I
Carubv10005698m.g Capsella rubella Carubv10005698m.g I
Carubv10018791m.g Capsella rubella Carubv10018791m.g I
cassava26193.m1 Manihot esculenta cassava26193.m1 I
cassava27350.m1 Manihot esculenta cassava27350.m1 I
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I
MDP0000578193 Malus domestica MDP0000578193 I
MDP0000650225 Malus domestica MDP0000650225 I
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I
Pm006678 Prunus mume Pm006678 I
Pm024725 Prunus mume Pm024725 I
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I
TCM_012057 Theobroma cacao TCM_012057 I
TCM_016886 Theobroma cacao TCM_016886 I
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I