Lus10028978.g (Linum usitatissimum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Lus10028978.g T050248_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK01630.1
M01118_2.00 		Cannabis sativa
GCACGTGD
HCACGTGC		 PBM
Lambert et al.(2019)
pTH11426 		0.914 0.880
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10028978 bHLH 35 84

Links

Other bHLH family TFs
Other Linum usitatissimum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001009501 Angiostrongylus cantonensis ACAC_0001009501 N 0.000
ACOC_0000845101 Angiostrongylus costaricensis ACOC_0000845101 N 0.000
ANCCAN_06410 Ancylostoma caninum ANCCAN_06410 N 0.000
ANCCEY_10735 Ancylostoma ceylanicum ANCCEY_10735 N 0.000
ANCDUO_14679 Ancylostoma duodenale ANCDUO_14679 N 0.000
CBG19687 Caenorhabditis briggsae CBG19687 N 0.000
CBN07460 Caenorhabditis brenneri CBN07460 N 0.000
CJA02893 Caenorhabditis japonica CJA02893 N 0.000
CRE03166 Caenorhabditis remanei CRE03166 N 0.000
DICVIV_11664 Dictyocaulus viviparus DICVIV_11664 N 0.000
genemark-nMf.1.1.scaf00604-processed-gene-0.10 Meloidogyne floridensis genemark-nMf.1.1.scaf00604-processed-gene-0.10 N 0.000
GPLIN_000355200 Globodera pallida GPLIN_000355200 N 0.000
HCOI00608900 Haemonchus contortus HCOI00608900 N 0.000
HPBE_0000407401 Heligmosomoides bakeri HPBE_0000407401 N 0.000
HPLM_0001001001 Haemonchus placei HPLM_0001001001 N 0.000
L596_g26620 Steinernema carpocapsae L596_g26620 N 0.000
L889_g15825 Steinernema feltiae L889_g15825 N 0.000
L892_g25366 Steinernema scapterisci L892_g25366 N 0.000
MhA1_Contig239.frz3.gene35 Meloidogyne hapla MhA1_Contig239.frz3.gene35 N 0.000
Minc00512 Meloidogyne incognita Minc00512 N 0.000
NBR_0001294901 Nippostrongylus brasiliensis NBR_0001294901 N 0.000
NECAME_16739 Necator americanus NECAME_16739 N 0.000
OESDEN_19099 Oesophagostomum dentatum OESDEN_19099 N 0.000
TELCIR_08212 Teladorsagia circumcincta TELCIR_08212 N 0.000
TELCIR_25960 Teladorsagia circumcincta TELCIR_25960 N 0.000
rps-13 Caenorhabditis elegans WBGene00004482 N 0.000