Pavir.Eb03429 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Eb03429 T050763_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb03429.1.p bHLH 270 310
Pavir.Eb03429.2.p bHLH 268 308

Links

Other bHLH family TFs
Other Panicum virgatum TFs

234 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28405.m000015 Ricinus communis 28405.m000015 N 0.883
30170.m014085 Ricinus communis 30170.m014085 N 0.890
Al_scaffold_0006_3588 Arabidopsis lyrata Al_scaffold_0006_3588 N 0.879
Aquca_010_00556 Aquilegia coerulea Aquca_010_00556 N 0.890
BHLH110 Arabidopsis thaliana AT1G27660 N 0.890
BHLH154 Arabidopsis thaliana AT2G31730 N 0.000
AT4G05170 Arabidopsis thaliana AT4G05170 N 0.879
Bo4g049510 Brassica oleracea Bo4g049510 N 0.000
Bo9g076250 Brassica oleracea Bo9g076250 N 0.867
Bostr.26675s0184 Boechera stricta Bostr.26675s0184 N 0.858
Bostr.2983s0058 Boechera stricta Bostr.2983s0058 N 0.879
Bra005644 Brassica rapa Bra005644 N 0.000
Bra029562 Brassica rapa Bra029562 N 0.867
Cagra.1981s0012 Capsella grandiflora Cagra.1981s0012 N 0.879
Carubv10003683m.g Capsella rubella Carubv10003683m.g N 0.879
cassava21180.m1 Manihot esculenta cassava21180.m1 N 0.894
cassava36740.valid.m1 Manihot esculenta cassava36740.valid.m1 N 0.883
cassava37772.valid.m1 Manihot esculenta cassava37772.valid.m1 N 0.883
cassava37773.valid.m1 Manihot esculenta cassava37773.valid.m1 N 0.883
cassava42530.valid.m1 Manihot esculenta cassava42530.valid.m1 N 0.890
Ca_04928 Cicer arietinum Ca_04928 N 0.890
chr5.CM0200.1030.nc Lotus japonicus chr5.CM0200.1030.nc N 0.859
Ciclev10001291m.g Citrus clementina Ciclev10001291m.g N 0.890
Cla011068 Citrullus lanatus Cla011068 N 0.858
Cla021101 Citrullus lanatus Cla021101 N 0.890
Cucsa.095280 Cucumis sativus Cucsa.095280 N 0.858
Cucsa.342640 Cucumis sativus Cucsa.342640 N 0.890
Cucsa.359290 Cucumis sativus Cucsa.359290 N 0.890
Eucgr.D00881 Eucalyptus grandis Eucgr.D00881 N 0.867
evm.TU.supercontig_99.32 Carica papaya evm.TU.supercontig_99.32 N 0.890
fgenesh2_kg.1__2924__AT1G27660.1 Arabidopsis lyrata fgenesh2_kg.1__2924__AT1G27660.1 N 0.890
gene11847-v1.0-hybrid Fragaria vesca gene11847-v1.0-hybrid N 0.890
Gorai.009G199600 Gossypium raimondii Gorai.009G199600 N 0.890
Gorai.011G135700 Gossypium raimondii Gorai.011G135700 N 0.000
GSMUA_Achr6G24280_001 Musa acuminata GSMUA_Achr6G24280_001 N 0.890
LjSGA_021413.2 Lotus japonicus LjSGA_021413.2 N 0.888
MDP0000168695 Malus domestica MDP0000168695 N 0.890
MDP0000262020 Malus domestica MDP0000262020 N 0.890
MDP0000687814 Malus domestica MDP0000687814 N 0.890
mgf013138m Mimulus guttatus mgf013138m N 0.890
MLOC_57076 Hordeum vulgare MLOC_57076 N 0.890
MTR_3g112170 Medicago truncatula MTR_3g112170 N 0.890
OLONG_021979 Oryza longistaminata OLONG_021979 N 0.890
OPUNC01G00360 Oryza punctata OPUNC01G00360 N 0.890
orange1.1g035657m.g Citrus sinensis orange1.1g035657m.g N 0.890
PDK_20s1709901g001 Phoenix dactylifera PDK_20s1709901g001 N 0.890
PGSC0003DMG400003746 Solanum tuberosum PGSC0003DMG400003746 N 0.890
Pm005865 Prunus mume Pm005865 N 0.890
Pm007388 Prunus mume Pm007388 N 0.883
POPTR_0002s03380 Populus trichocarpa POPTR_0002s03380 N 0.890
POPTR_0005s25240 Populus trichocarpa POPTR_0005s25240 N 0.890
POPTR_0013s13050 Populus trichocarpa POPTR_0013s13050 N 0.883
POPTR_0019s12530 Populus trichocarpa POPTR_0019s12530 N 0.883
PRUPE_ppa005486mg Prunus persica PRUPE_ppa005486mg N 0.890
PRUPE_ppa012528mg Prunus persica PRUPE_ppa012528mg N 0.883
SapurV1A.0006s0290 Salix purpurea SapurV1A.0006s0290 N 0.890
SapurV1A.0188s0290 Salix purpurea SapurV1A.0188s0290 N 0.890
SapurV1A.0388s0180 Salix purpurea SapurV1A.0388s0180 N 0.883
Sb03g008830 Sorghum bicolor Sb03g008830 N 0.890
Solyc02g084880.2 Solanum lycopersicum Solyc02g084880.2 N 0.890
Solyc04g080710.2 Solanum lycopersicum Solyc04g080710.2 N 0.890
TCM_019871 Theobroma cacao TCM_019871 N 0.883
TCM_034098 Theobroma cacao TCM_034098 N 0.890
Thhalv10017421m.g Eutrema salsugineum Thhalv10017421m.g N 0.000
Thhalv10029319m.g Eutrema salsugineum Thhalv10029319m.g N 0.879
VIT_05s0094g00480 Vitis vinifera VIT_05s0094g00480 N 0.858
VIT_18s0001g12970 Vitis vinifera VIT_18s0001g12970 N 0.890