CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.4290s0007
(
Capsella grandiflora
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cagra.4290s0007
T071521_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.4290s0007.1.p
bZIP
128
190
TDERKRKRMESNRESAKRSRMRKQSHIDNLRNQVNRLDLENRELGNRLRLVLHQLQRVNTDNN
Links
Other
bZIP
family TFs
Other
Capsella grandiflora
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28952.m000016
Ricinus communis
28952.m000016
I
0.000
AMTR_s00024p00098860
Amborella trichopoda
AMTR_s00024p00098860
I
0.000
Aquca_002_01252
Aquilegia coerulea
Aquca_002_01252
I
0.000
AtIDD16
Arabidopsis thaliana
AT1G25250
I
0.000
IDD14
Arabidopsis thaliana
AT1G68130
I
0.000
SGR5
Arabidopsis thaliana
AT2G01940
D
0.000
BGIOSGA011151
Oryza indica
BGIOSGA011151
I
0.000
Bo2g134790
Brassica oleracea
Bo2g134790
I
0.000
Bo3g139880
Brassica oleracea
Bo3g139880
I
0.000
Bo5g043540
Brassica oleracea
Bo5g043540
I
0.000
Bo6g097320
Brassica oleracea
Bo6g097320
I
0.000
Bo6g106560
Brassica oleracea
Bo6g106560
I
0.000
Bo9g070370
Brassica oleracea
Bo9g070370
I
0.000
Bostr.0556s0022
Boechera stricta
Bostr.0556s0022
I
0.000
Bostr.15697s0010
Boechera stricta
Bostr.15697s0010
I
0.000
Bostr.26959s0085
Boechera stricta
Bostr.26959s0085
I
0.000
Bra004050
Brassica rapa
Bra004050
I
0.000
Bra004283
Brassica rapa
Bra004283
I
0.000
Bra010981
Brassica rapa
Bra010981
I
0.000
Bra017432
Brassica rapa
Bra017432
I
0.000
Bra024771
Brassica rapa
Bra024771
I
0.000
Bra024841
Brassica rapa
Bra024841
I
0.000
Bra026624
Brassica rapa
Bra026624
I
0.000
BRADI1G68730
Brachypodium distachyon
BRADI1G68730
I
0.000
Cagra.1111s0006
Capsella grandiflora
Cagra.1111s0006
I
0.000
Cagra.2231s0014
Capsella grandiflora
Cagra.2231s0014
I
0.000
Cagra.3834s0006
Capsella grandiflora
Cagra.3834s0006
I
0.000
Carubv10009424m.g
Capsella rubella
Carubv10009424m.g
I
0.000
Carubv10017254m.g
Capsella rubella
Carubv10017254m.g
I
0.000
Carubv10020337m.g
Capsella rubella
Carubv10020337m.g
I
0.000
cassava18079.valid.m1
Manihot esculenta
cassava18079.valid.m1
I
0.000
cassava1947.valid.m1
Manihot esculenta
cassava1947.valid.m1
I
0.000
cassava36596.valid.m1
Manihot esculenta
cassava36596.valid.m1
I
0.000
Ca_05083
Cicer arietinum
Ca_05083
I
0.000
Ca_22171
Cicer arietinum
Ca_22171
I
0.000
chr4.CM0387.280.nc
Lotus japonicus
chr4.CM0387.280.nc
I
0.000
Ciclev10015315m.g
Citrus clementina
Ciclev10015315m.g
I
0.000
Ciclev10020125m.g
Citrus clementina
Ciclev10020125m.g
I
0.000
Cla005913
Citrullus lanatus
Cla005913
I
0.000
Cla018945
Citrullus lanatus
Cla018945
I
0.000
Cucsa.112090
Cucumis sativus
Cucsa.112090
I
0.000
Cucsa.122150
Cucumis sativus
Cucsa.122150
I
0.000
estExt_Genewise1.C_2180024
Physcomitrella patens
estExt_Genewise1.C_2180024
N
0.000
Eucgr.G02066
Eucalyptus grandis
Eucgr.G02066
I
0.000
Eucgr.H00574
Eucalyptus grandis
Eucgr.H00574
I
0.000
Eucgr.K02292
Eucalyptus grandis
Eucgr.K02292
I
0.000
evm.TU.supercontig_2.118
Carica papaya
evm.TU.supercontig_2.118
I
0.000
evm.TU.supercontig_7.131
Carica papaya
evm.TU.supercontig_7.131
I
0.000
F775_43255
Aegilops tauschii
F775_43255
I
0.000
AtIDD14
Arabidopsis lyrata
fgenesh2_kg.2__1036__AT1G68130.1
I
0.000
SGR5
Arabidopsis lyrata
fgenesh2_kg.5__108__AT2G01940.1
I
0.000
gene00618-v1.0-hybrid
Fragaria vesca
gene00618-v1.0-hybrid
I
0.000
gene09325-v1.0-hybrid
Fragaria vesca
gene09325-v1.0-hybrid
I
0.000
GLYMA05G26780
Glycine max
GLYMA05G26780
I
0.000
GLYMA05G33590
Glycine max
GLYMA05G33590
I
0.000
GLYMA07G12170
Glycine max
GLYMA07G12170
I
0.000
GLYMA08G06130
Glycine max
GLYMA08G06130
I
0.000
GLYMA08G09760
Glycine max
GLYMA08G09760
I
0.000
GLYMA09G30030
Glycine max
GLYMA09G30030
I
0.000
Gorai.002G171100
Gossypium raimondii
Gorai.002G171100
I
0.000
Gorai.005G134600
Gossypium raimondii
Gorai.005G134600
I
0.000
Gorai.005G154300
Gossypium raimondii
Gorai.005G154300
I
0.000
Gorai.006G190500
Gossypium raimondii
Gorai.006G190500
I
0.000
Gorai.007G002600
Gossypium raimondii
Gorai.007G002600
I
0.000
Gorai.008G169500
Gossypium raimondii
Gorai.008G169500
I
0.000
Gorai.008G293000
Gossypium raimondii
Gorai.008G293000
I
0.000
Gorai.009G329200
Gossypium raimondii
Gorai.009G329200
I
0.000
GRMZM2G074032
Zea mays
GRMZM2G074032
I
0.000
GRMZM2G465595
Zea mays
GRMZM2G465595
I
0.000
GSMUA_Achr10G29940_001
Musa acuminata
GSMUA_Achr10G29940_001
I
0.000
GSMUA_Achr5G23130_001
Musa acuminata
GSMUA_Achr5G23130_001
I
0.000
GSMUA_Achr6G02490_001
Musa acuminata
GSMUA_Achr6G02490_001
I
0.000
GSMUA_Achr7G18610_001
Musa acuminata
GSMUA_Achr7G18610_001
I
0.000
LPERR03G08760
Leersia perrieri
LPERR03G08760
I
0.000
LPERR08G14510
Leersia perrieri
LPERR08G14510
I
0.000
Lus10026369.g
Linum usitatissimum
Lus10026369.g
I
0.000
Lus10031314.g
Linum usitatissimum
Lus10031314.g
I
0.000
Lus10031882.g
Linum usitatissimum
Lus10031882.g
I
0.000
mgf008235m
Mimulus guttatus
mgf008235m
I
0.000
OB09G18760
Oryza brachyantha
OB09G18760
I
0.000
OBART08G17550
Oryza barthii
OBART08G17550
I
0.000
OGLUM03G09920
Oryza glumaepatula
OGLUM03G09920
I
0.000
OGLUM08G18370
Oryza glumaepatula
OGLUM08G18370
I
0.000
OMERI03G09110
Oryza meridionalis
OMERI03G09110
I
0.000
OMERI08G14120
Oryza meridionalis
OMERI08G14120
I
0.000
ONIVA03G10380
Oryza nivara
ONIVA03G10380
I
0.000
ONIVA08G19430
Oryza nivara
ONIVA08G19430
I
0.000
OPUNC03G09440
Oryza punctata
OPUNC03G09440
I
0.000
OPUNC08G15410
Oryza punctata
OPUNC08G15410
I
0.000
orange1.1g014184m.g
Citrus sinensis
orange1.1g014184m.g
I
0.000
ORGLA03G0094200
Oryza glaberrima
ORGLA03G0094200
I
0.000
ORGLA08G0153600
Oryza glaberrima
ORGLA08G0153600
I
0.000
ORGLA09G0169200
Oryza glaberrima
ORGLA09G0169200
I
0.000
ORUFI03G10000
Oryza rufipogon
ORUFI03G10000
I
0.000
OS03G0237250
Oryza sativa
OS03G0237250
I
0.000
OS08G0467100
Oryza sativa
OS08G0467100
I
0.000
Pavir.J12350
Panicum virgatum
Pavir.J12350
I
0.000
PGSC0003DMG400026959
Solanum tuberosum
PGSC0003DMG400026959
I
0.000
PGSC0003DMG400031049
Solanum tuberosum
PGSC0003DMG400031049
I
0.000
PK17145.1
Cannabis sativa
PK17145.1
I
0.000
PK25720.1
Cannabis sativa
PK25720.1
I
0.000
Pm005926
Prunus mume
Pm005926
I
0.000
Pm025274
Prunus mume
Pm025274
I
0.000
POPTR_0008s13980
Populus trichocarpa
POPTR_0008s13980
I
0.000
POPTR_0010s11160
Populus trichocarpa
POPTR_0010s11160
I
0.000
POPTR_0012s03730
Populus trichocarpa
POPTR_0012s03730
I
0.000
POPTR_0015s05180
Populus trichocarpa
POPTR_0015s05180
I
0.000
PRUPE_ppa004447mg
Prunus persica
PRUPE_ppa004447mg
I
0.000
PRUPE_ppa005331mg
Prunus persica
PRUPE_ppa005331mg
I
0.000
SapurV1A.0015s0850
Salix purpurea
SapurV1A.0015s0850
I
0.000
SapurV1A.0055s0020
Salix purpurea
SapurV1A.0055s0020
I
0.000
SapurV1A.0074s0350
Salix purpurea
SapurV1A.0074s0350
I
0.000
SapurV1A.1169s0070
Salix purpurea
SapurV1A.1169s0070
I
0.000
Solyc01g005060.2
Solanum lycopersicum
Solyc01g005060.2
I
0.000
Solyc06g072360.2
Solanum lycopersicum
Solyc06g072360.2
I
0.000
TCM_011210
Theobroma cacao
TCM_011210
I
0.000
TCM_039880
Theobroma cacao
TCM_039880
I
0.000
Thhalv10004221m.g
Eutrema salsugineum
Thhalv10004221m.g
I
0.000
Thhalv10009376m.g
Eutrema salsugineum
Thhalv10009376m.g
I
0.000
Thhalv10018614m.g
Eutrema salsugineum
Thhalv10018614m.g
I
0.000
Traes_4AS_2718699A7
Triticum aestivum
Traes_4AS_2718699A7
I
0.000
VIT_01s0011g06400
Vitis vinifera
VIT_01s0011g06400
I
0.000
VIT_17s0000g01870
Vitis vinifera
VIT_17s0000g01870
I
0.000