CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ODR2
(
Anopheles gambiae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AGAP008222
T080476_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.825
0.974
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.825
0.974
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK
MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.825
0.974
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.814
0.957
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.814
0.957
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.814
0.957
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.814
0.957
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD
HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.795
0.887
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.795
0.887
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.795
0.887
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND
HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.795
0.887
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP008222-PA
C2H2 ZF
225
247
FICKFCNRQFTKSYNLLIHERTH
AGAP008222-PA
C2H2 ZF
253
275
YSCDICLKAFRRQDHLRDHRYIH
AGAP008222-PA
C2H2 ZF
281
303
FKCTECGKGFCQSRTLAVHKILH
AGAP008222-PA
C2H2 ZF
309
331
HKCPVCNRSFNQRSNLKTHLLTH
AGAP008222-PA
C2H2 ZF
337
359
YECNSCGKVFRRNCDLRRHALTH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles gambiae
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28629.m000575
Ricinus communis
28629.m000575
N
0.000
30055.m001588
Ricinus communis
30055.m001588
N
0.000
AMTR_s00040p00117430
Amborella trichopoda
AMTR_s00040p00117430
N
0.000
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.000
NAC090
Arabidopsis thaliana
AT5G22380
N
0.000
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
0.000
BGIOSGA034823
Oryza indica
BGIOSGA034823
N
0.000
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
0.000
Bo2g023870
Brassica oleracea
Bo2g023870
N
0.000
Bo3g016870
Brassica oleracea
Bo3g016870
N
0.000
Bo9g148540
Brassica oleracea
Bo9g148540
N
0.000
Bostr.26527s0039
Boechera stricta
Bostr.26527s0039
N
0.000
Bra002408
Brassica rapa
Bra002408
N
0.000
Bra006624
Brassica rapa
Bra006624
N
0.000
Bra020188
Brassica rapa
Bra020188
N
0.000
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
0.000
Cagra.0846s0014
Capsella grandiflora
Cagra.0846s0014
N
0.000
Carubv10001788m.g
Capsella rubella
Carubv10001788m.g
N
0.000
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.000
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.000
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
0.000
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.000
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.000
cassava3989.m1
Manihot esculenta
cassava3989.m1
N
0.000
Ca_00818
Cicer arietinum
Ca_00818
N
0.000
Ca_15160
Cicer arietinum
Ca_15160
N
0.000
Ciclev10012468m.g
Citrus clementina
Ciclev10012468m.g
N
0.000
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.000
Cla003087
Citrullus lanatus
Cla003087
I
0.000
Cla008777
Citrullus lanatus
Cla008777
N
0.000
Cla018691
Citrullus lanatus
Cla018691
N
0.000
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.000
Cucsa.185760
Cucumis sativus
Cucsa.185760
N
0.000
Cucsa.319840
Cucumis sativus
Cucsa.319840
I
0.000
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.000
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.000
Eucgr.A02637
Eucalyptus grandis
Eucgr.A02637
N
0.000
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.000
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.000
Eucgr.C02446
Eucalyptus grandis
Eucgr.C02446
N
0.000
Eucgr.I00583
Eucalyptus grandis
Eucgr.I00583
N
0.000
Eucgr.I00587
Eucalyptus grandis
Eucgr.I00587
N
0.000
Eucgr.J00505
Eucalyptus grandis
Eucgr.J00505
N
0.000
Eucgr.J00508
Eucalyptus grandis
Eucgr.J00508
N
0.000
Eucgr.J00509
Eucalyptus grandis
Eucgr.J00509
N
0.000
Eucgr.J00511
Eucalyptus grandis
Eucgr.J00511
N
0.000
Eucgr.J00512
Eucalyptus grandis
Eucgr.J00512
N
0.000
Eucgr.J00513
Eucalyptus grandis
Eucgr.J00513
N
0.000
Eucgr.J00514
Eucalyptus grandis
Eucgr.J00514
N
0.000
Eucgr.J00516
Eucalyptus grandis
Eucgr.J00516
N
0.000
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
0.000
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
0.000
Eucgr.J00519
Eucalyptus grandis
Eucgr.J00519
N
0.000
Eucgr.J00520
Eucalyptus grandis
Eucgr.J00520
N
0.000
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
0.000
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.000
F775_19761
Aegilops tauschii
F775_19761
N
0.000
anac090
Arabidopsis lyrata
fgenesh2_kg.6__2228__AT5G22380.1
N
0.000
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.000
gene21734-v1.0-hybrid
Fragaria vesca
gene21734-v1.0-hybrid
N
0.000
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.000
GLYMA12G09670
Glycine max
GLYMA12G09670
N
0.000
GLYMA12G31150
Glycine max
GLYMA12G31150
N
0.000
GLYMA13G39160
Glycine max
GLYMA13G39160
N
0.000
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.000
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.000
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.000
Gorai.006G113000
Gossypium raimondii
Gorai.006G113000
N
0.000
Gorai.009G399900
Gossypium raimondii
Gorai.009G399900
N
0.000
GRMZM2G439903
Zea mays
GRMZM2G439903
N
0.000
GRMZM5G832473
Zea mays
GRMZM5G832473
N
0.000
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
0.000
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.000
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
0.000
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.000
LjSGA_014778.2
Lotus japonicus
LjSGA_014778.2
N
0.000
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
0.000
LPERR05G14390
Leersia perrieri
LPERR05G14390
N
0.000
LPERR11G02950
Leersia perrieri
LPERR11G02950
N
0.000
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
0.000
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
0.000
Lus10029410.g
Linum usitatissimum
Lus10029410.g
N
0.000
MDP0000130797
Malus domestica
MDP0000130797
N
0.000
MDP0000205938
Malus domestica
MDP0000205938
N
0.000
MDP0000252435
Malus domestica
MDP0000252435
N
0.000
MDP0000252746
Malus domestica
MDP0000252746
N
0.000
MDP0000506233
Malus domestica
MDP0000506233
N
0.000
MDP0000759504
Malus domestica
MDP0000759504
N
0.000
mgf020234m
Mimulus guttatus
mgf020234m
N
0.000
mgf024293m
Mimulus guttatus
mgf024293m
N
0.000
MTR_2g086690
Medicago truncatula
MTR_2g086690
N
0.000
MTR_4g052620
Medicago truncatula
MTR_4g052620
N
0.000
MTR_7g105170
Medicago truncatula
MTR_7g105170
N
0.000
OB05G26010
Oryza brachyantha
OB05G26010
N
0.000
OB11G12830
Oryza brachyantha
OB11G12830
N
0.000
OB12G13350
Oryza brachyantha
OB12G13350
N
0.000
OBART01G38190
Oryza barthii
OBART01G38190
N
0.000
OBART11G03530
Oryza barthii
OBART11G03530
N
0.000
OBART12G03440
Oryza barthii
OBART12G03440
N
0.000
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
0.000
OGLUM11G03170
Oryza glumaepatula
OGLUM11G03170
N
0.000
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
0.000
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
0.000
OMERI11G03230
Oryza meridionalis
OMERI11G03230
N
0.000
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
0.000
ONIVA11G03690
Oryza nivara
ONIVA11G03690
N
0.000
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
0.000
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N
0.000
OPUNC11G03220
Oryza punctata
OPUNC11G03220
N
0.000
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
0.000
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.000
orange1.1g039532m.g
Citrus sinensis
orange1.1g039532m.g
N
0.000
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
0.000
ORGLA11G0032800
Oryza glaberrima
ORGLA11G0032800
N
0.000
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
0.000
ORGLA12G0180300
Oryza glaberrima
ORGLA12G0180300
N
0.000
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
0.000
ORUFI11G03420
Oryza rufipogon
ORUFI11G03420
N
0.000
OS01G0862800
Oryza sativa
OS01G0862800
N
0.000
OS11G0154500
Oryza sativa
OS11G0154500
N
0.000
OS12G0156100
Oryza sativa
OS12G0156100
N
0.000
Pavir.Bb01366
Panicum virgatum
Pavir.Bb01366
N
0.000
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
0.000
Pavir.Ha01768
Panicum virgatum
Pavir.Ha01768
N
0.000
Pavir.Hb01808
Panicum virgatum
Pavir.Hb01808
N
0.000
Pavir.J02276
Panicum virgatum
Pavir.J02276
N
0.000
Pavir.J13106
Panicum virgatum
Pavir.J13106
N
0.000
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.000
PK27925.1
Cannabis sativa
PK27925.1
N
0.000
PK29014.1
Cannabis sativa
PK29014.1
N
0.000
Pm001403
Prunus mume
Pm001403
N
0.000
Pm001404
Prunus mume
Pm001404
N
0.000
POPTR_0001s22630
Populus trichocarpa
POPTR_0001s22630
N
0.000
POPTR_0006s22580
Populus trichocarpa
POPTR_0006s22580
N
0.000
POPTR_0009s02430
Populus trichocarpa
POPTR_0009s02430
N
0.000
POPTR_0016s07680
Populus trichocarpa
POPTR_0016s07680
N
0.000
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.000
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.000
SapurV1A.0450s0140
Salix purpurea
SapurV1A.0450s0140
N
0.000
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
0.000
SapurV1A.0768s0010
Salix purpurea
SapurV1A.0768s0010
N
0.000
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
0.000
SapurV1A.1671s0050
Salix purpurea
SapurV1A.1671s0050
N
0.000
SapurV1A.3648s0010
Salix purpurea
SapurV1A.3648s0010
N
0.000
Sb03g040720
Sorghum bicolor
Sb03g040720
N
0.000
Sb05g003400
Sorghum bicolor
Sb05g003400
N
0.000
Si002586m.g
Setaria italica
Si002586m.g
N
0.000
Si025833m.g
Setaria italica
Si025833m.g
N
0.000
Si026707m.g
Setaria italica
Si026707m.g
N
0.000
Solyc09g010160.1
Solanum lycopersicum
Solyc09g010160.1
N
0.000
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.000
TCM_022676
Theobroma cacao
TCM_022676
N
0.000
TCM_022690
Theobroma cacao
TCM_022690
N
0.000
TCM_041364
Theobroma cacao
TCM_041364
N
0.000
Thhalv10014563m.g
Eutrema salsugineum
Thhalv10014563m.g
N
0.000
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
0.000
TRIUR3_34272
Triticum urartu
TRIUR3_34272
N
0.000
VIT_06s0080g00780
Vitis vinifera
VIT_06s0080g00780
N
0.000
VIT_18s0041g00700
Vitis vinifera
VIT_18s0041g00700
N
0.000