DAPPUDRAFT_14328 (Daphnia pulex)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 DAPPUDRAFT_14328 T085335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.774 0.841
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.774 0.841
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.774 0.841
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.774 0.841
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.770 0.858
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.770 0.858
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.770 0.858
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.770 0.858
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.757 0.823
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.757 0.823
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.757 0.823
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.756 0.823
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.756 0.823
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.756 0.823
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX69682 C2H2 ZF 43 65
EFX69682 C2H2 ZF 75 96
EFX69682 C2H2 ZF 100 122
EFX69682 C2H2 ZF 128 150
EFX69682 C2H2 ZF 156 177

Links

Other C2H2 ZF family TFs
Other Daphnia pulex TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL005176 Aedes aegypti AAEL005176 I 0.770
AAEL009230 Aedes aegypti AAEL009230 I 0.768
AAEL014359 Aedes aegypti AAEL014359 I 0.768
AATE010651 Anopheles atroparvus AATE010651 I 0.770
AATE020159 Anopheles atroparvus AATE020159 I 0.772
ACHR010032 Anopheles christyi ACHR010032 I 0.772
ACOM031677 Anopheles coluzzii ACOM031677 I 0.770
ACOM031685 Anopheles coluzzii ACOM031685 I 0.772
ACUA003488 Anopheles culicifacies ACUA003488 I 0.768
ACUA020861 Anopheles culicifacies ACUA020861 I 0.768
ACUA022497 Anopheles culicifacies ACUA022497 I 0.772
ACYPI004643 Acyrthosiphon pisum ACYPI004643 I 0.768
AFAF007486 Anopheles farauti AFAF007486 I 0.772
AFAF017001 Anopheles farauti AFAF017001 I 0.770
AFUN001835 Anopheles funestus AFUN001835 I 0.768
AFUN002786 Anopheles funestus AFUN002786 I 0.772
AGAP006791 Anopheles gambiae AGAP006791 I 0.772
AGAP006794 Anopheles gambiae AGAP006794 I 0.770
ALUE_0002049001 Ascaris lumbricoides ALUE_0002049001 I 0.771
AMEC013076 Anopheles melas AMEC013076 I 0.772
AMEC015586 Anopheles melas AMEC015586 I 0.770
AMEM013788 Anopheles merus AMEM013788 I 0.772
AMEM017035 Anopheles merus AMEM017035 I 0.770
AQUA003879 Anopheles quadriannulatus AQUA003879 I 0.772
ASIS012063 Anopheles sinensis ASIS012063 I 0.770
ASIS022059 Anopheles sinensis ASIS022059 I 0.772
ASTEI08595 Anopheles stephensi ASTEI08595 I 0.768
A_07725 Schistosoma haematobium A_07725 I 0.769
BGIBMGA000607 Bombyx mori BGIBMGA000607 I 0.778
CapteG149623 Capitella teleta CapteG149623 I 0.772
CapteG176021 Capitella teleta CapteG176021 I 0.782
CapteG223614 Capitella teleta CapteG223614 I 0.780
CapteG76620 Capitella teleta CapteG76620 I 0.782
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.768
CGI_10023711 Crassostrea gigas CGI_10023711 I 0.775
CLEC001353 Cimex lectularius CLEC001353 I 0.770
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I 0.770
CPIJ004535 Culex quinquefasciatus CPIJ004535 I 0.768
CPIJ017517 Culex quinquefasciatus CPIJ017517 I 0.770
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I 0.768
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I 0.770
csin111588 Clonorchis sinensis csin111588 I 0.769
D915_06717 Fasciola hepatica D915_06717 I 0.769
D917_06340 Trichinella nativa D917_06340 I 0.761
D918_03987 Trichuris suis D918_03987 I 0.765
DAPPUDRAFT_129982 Daphnia pulex DAPPUDRAFT_129982 I 0.764
DME_0000421901 Dracunculus medinensis DME_0000421901 I 0.759
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I 0.769
EFV52761 Trichinella spiralis EFV52761 I 0.761
SCRT2 Anolis carolinensis ENSACAG00000016109 I 0.770
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I 0.774
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I 0.772
ENSAMXG00000018604 Astyanax mexicanus ENSAMXG00000018604 I 0.765
ENSAMXG00000018733 Astyanax mexicanus ENSAMXG00000018733 I 0.763
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I 0.772
SCRT1 Bos taurus ENSBTAG00000046208 I 0.774
SCRT2 Callithrix jacchus ENSCJAG00000020870 I 0.757
SCRT1 Callithrix jacchus ENSCJAG00000021406 I 0.774
SCRT2 Cavia porcellus ENSCPOG00000008447 I 0.757
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I 0.774
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I 0.774
ENSCSAG00000010473 Chlorocebus sabaeus ENSCSAG00000010473 I 0.757
scrt1b Danio rerio ENSDARG00000040214 I 0.770
scrt2 Danio rerio ENSDARG00000056175 I 0.763
scrt1a Danio rerio ENSDARG00000100821 I 0.770
SCRT2 Dasypus novemcinctus ENSDNOG00000002583 I 0.757
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I 0.774
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I 0.772
SCRT2 Felis catus ENSFCAG00000010922 I 0.757
SCRT2 Homo sapiens ENSG00000215397 D 0.757
SCRT1 Homo sapiens ENSG00000261678 D 0.774
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I 0.772
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I 0.770
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I 0.763
SCRT2 Gallus gallus ENSGALG00000028912 I 0.770
SCRT1 Gorilla gorilla ENSGGOG00000013612 I 0.774
ENSGGOG00000015228 Gorilla gorilla ENSGGOG00000015228 I 0.757
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I 0.772
ENSGMOG00000019519 Gadus morhua ENSGMOG00000019519 I 0.763
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I 0.770
SCRT2 Loxodonta africana ENSLAFG00000030340 I 0.757
SCRT1 Loxodonta africana ENSLAFG00000031587 I 0.774
ENSLOCG00000002246 Lepisosteus oculatus ENSLOCG00000002246 I 0.759
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I 0.770
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I 0.765
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I 0.770
ENSMMUG00000017354 Macaca mulatta ENSMMUG00000017354 I 0.757
SCRT1 Macaca mulatta ENSMMUG00000028886 I 0.774
SCRT2 Monodelphis domestica ENSMODG00000019528 I 0.765
Scrt1 Mus musculus ENSMUSG00000048385 I 0.774
Scrt2 Mus musculus ENSMUSG00000060257 I 0.757
ENSNLEG00000009420 Nomascus leucogenys ENSNLEG00000009420 I 0.757
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I 0.774
SCRT1 Otolemur garnettii ENSOGAG00000026538 I 0.774
SCRT2 Otolemur garnettii ENSOGAG00000031187 I 0.757
ENSONIG00000003152 Oreochromis niloticus ENSONIG00000003152 I 0.772
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I 0.772
ENSONIG00000016758 Oreochromis niloticus ENSONIG00000016758 I 0.763
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I 0.772
scrt1b Oryzias latipes ENSORLG00000008641 I 0.772
scrt2 Oryzias latipes ENSORLG00000015072 I 0.763
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I 0.774
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I 0.772
ENSPFOG00000007738 Poecilia formosa ENSPFOG00000007738 I 0.763
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I 0.772
Scrt2 Rattus norvegicus ENSRNOG00000005148 I 0.757
Scrt1 Rattus norvegicus ENSRNOG00000025594 I 0.774
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I 0.770
SCRT1 Sus scrofa ENSSSCG00000025879 I 0.774
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I 0.774
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I 0.770
scrt2 Tetraodon nigroviridis ENSTNIG00000012473 I 0.763
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I 0.772
scrt2 Takifugu rubripes ENSTRUG00000007620 I 0.763
scrt1b Takifugu rubripes ENSTRUG00000011637 I 0.772
SCRT1 Takifugu rubripes ENSTRUG00000012719 I 0.772
SCRT2 Tursiops truncatus ENSTTRG00000007039 I 0.757
ENSXMAG00000011590 Xiphophorus maculatus ENSXMAG00000011590 I 0.763
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I 0.772
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I 0.772
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I 0.787
EVEC_0000710001 Enterobius vermicularis EVEC_0000710001 I 0.761
scrt Drosophila melanogaster FBgn0004880 D 0.770
CG12605 Drosophila melanogaster FBgn0035481 D 0.756
GA11715 Drosophila pseudoobscura FBgn0071765 I 0.756
GF24781 Drosophila ananassae FBgn0101774 I 0.756
GF25020 Drosophila ananassae FBgn0102012 I 0.770
GG14232 Drosophila erecta FBgn0106493 I 0.756
GG15174 Drosophila erecta FBgn0107427 I 0.770
GH15771 Drosophila grimshawi FBgn0123242 I 0.770
GI12551 Drosophila mojavensis FBgn0135308 I 0.770
GM11368 Drosophila sechellia FBgn0166311 I 0.770
GM14024 Drosophila sechellia FBgn0168953 I 0.756
GM14603 Drosophila sechellia FBgn0169524 I 0.770
GD13304 Drosophila simulans FBgn0185023 I 0.756
GD13305 Drosophila simulans FBgn0185024 I 0.756
GD13794 Drosophila simulans FBgn0185494 I 0.770
GJ16103 Drosophila virilis FBgn0203288 I 0.770
GK16692 Drosophila willistoni FBgn0218694 I 0.756
GK17507 Drosophila willistoni FBgn0219506 I 0.770
GE20660 Drosophila yakuba FBgn0237965 I 0.756
GE21392 Drosophila yakuba FBgn0238652 I 0.770
HHAL001092-PA Halyomorpha halys HHAL001092-PA I 0.770
HHAL001095-PA Halyomorpha halys HHAL001095-PA I 0.780
HMEL014701 Heliconius melpomene HMEL014701 I 0.778
ISCW021315 Ixodes scapularis ISCW021315 I 0.777
KGM_21493 Danaus plexippus KGM_21493 I 0.778
L596_g15116 Steinernema carpocapsae L596_g15116 I 0.771
L798_11766 Zootermopsis nevadensis L798_11766 I 0.770
L889_g21793 Steinernema feltiae L889_g21793 I 0.773
L892_g9690 Steinernema scapterisci L892_g9690 I 0.771
L893_g27175 Steinernema glaseri L893_g27175 I 0.771
L898_g5709 Steinernema monticolum L898_g5709 I 0.764
LCUP005780 Lucilia cuprina LCUP005780 I 0.770
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.770
LotgiG58520 Lottia gigantea LotgiG58520 I 0.762
MCINX009925 Melitaea cinxia MCINX009925 I 0.778
MDOA005810 Musca domestica MDOA005810 I 0.770
NEMVEDRAFT_v1g108258 Nematostella vectensis NEMVEDRAFT_v1g108258 I 0.761
nRc.2.0.1.g22231 Romanomermis culicivorax nRc.2.0.1.g22231 I 0.778
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I 0.778
Ogr05737 Ophisaurus gracilis Ogr05737 I 0.771
PHUM474180 Pediculus humanus PHUM474180 I 0.770
PPAI000594 Phlebotomus papatasi PPAI000594 I 0.770
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I 0.766
Pvit_17685 Pogona vitticeps Pvit_17685 I 0.763
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I 0.781
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I 0.771
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I 0.770
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I 0.769
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I 0.771
SMAR010760 Strigamia maritima SMAR010760 I 0.770
Smp_054430 Schistosoma mansoni Smp_054430 I 0.769
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I 0.769
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I 0.769
SMU15013927 Schmidtea mediterranea SMU15013927 I 0.780
SMUV_0000843501 Syphacia muris SMUV_0000843501 I 0.761
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I 0.775
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I 0.768
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I 0.766
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I 0.775
T265_09545 Opisthorchis viverrini T265_09545 I 0.769
TCNE_0000669301 Toxocara canis TCNE_0000669301 I 0.771
tetur08g05890 Tetranychus urticae tetur08g05890 I 0.772
TMUE_s0027002700 Trichuris muris TMUE_s0027002700 I 0.765
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I 0.769
TTRE_0000441701 Trichuris trichiura TTRE_0000441701 I 0.765
scrt2 Xenopus tropicalis XB-GENE-5995512 I 0.770