CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF8
(
Equus caballus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSECAG00000013553
T093210_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF8
M08401_2.00
Homo sapiens
NNBVYGGTAYGYCHHNDH
DHNDDGRCRTACCRBVNN
ChIP-seq
Schmitges et al.(2016)
P17098_1-6.RCADE
0.827
1.000
ZNF8
M07781_2.00
Homo sapiens
RYRTACCRCWKY
RMWGYGGTAYRY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF8.RCADE.OriginalMapping
0.827
1.000
ZNF8
M08961_2.00
Homo sapiens
TCCATTGTATGGATRTACCACA
TGTGGTAYATCCATACAATGGA
Misc
Kulakovskiy et al.(2013)
ZNF8_HUMAN.H11MO.0.C
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000011274
C2H2 ZF
258
280
YKCTDCGKSFNHNAHLTVHKRIH
ENSECAP00000011274
C2H2 ZF
286
308
YMCKECGKAFSQNSSLVQHERIH
ENSECAP00000011274
C2H2 ZF
314
336
YKCAECGKSFCHSTHLTVHRRIH
ENSECAP00000011274
C2H2 ZF
342
364
YECQDCGRAFNQNSSLGRHKRTH
ENSECAP00000011274
C2H2 ZF
370
392
YTCSVCGKSFSRTTCLFLHLRTH
ENSECAP00000011274
C2H2 ZF
398
420
YECNHCGKGFRHSSSLAQHQRKH
Links
Other
C2H2 ZF
family TFs
Other
Equus caballus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.2.501.1
Phytophthora capsici
e_gw1.2.501.1
N
e_gw1.34.32.1
Phytophthora capsici
e_gw1.34.32.1
N
F443_10160
Phytophthora parasitica
F443_10160
N
F443_10169
Phytophthora parasitica
F443_10169
N
fgenesh_scip_prom.28083.659
Phytophthora lateralis
fgenesh_scip_prom.28083.659
N
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
fgenesh_scip_prom.46568.9634
Phytophthora kernoviae
fgenesh_scip_prom.46568.9634
N
maker-pir_contig_723-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_723-fgenesh-gene-0.2
N
Phyra76423
Phytophthora ramorum
Phyra76423
N
Phyra76424
Phytophthora ramorum
Phyra76424
N
Physo128916
Phytophthora sojae
Physo128916
N
PYU1_G008755
Pythium ultimum
PYU1_G008755
N
PYU1_G008757
Pythium ultimum
PYU1_G008757
N
snap_masked-pve_contig_11-abinit-gene-0.108
Pythium vexans
snap_masked-pve_contig_11-abinit-gene-0.108
N