CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSPSIG00000006739
(
Pelodiscus sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPSIG00000006739
T107555_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000007299
C2H2 ZF
243
265
MRCVICHRGFNSRSNLRSHMRIH
ENSPSIP00000007299
C2H2 ZF
271
293
FVCRFCNRRFSQSSTLRNHVRLH
ENSPSIP00000007299
C2H2 ZF
299
323
YKCQVCQSAYSQLAGLRAHQKSARH
Links
Other
C2H2 ZF
family TFs
Other
Pelodiscus sinensis
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29822.m003476
Ricinus communis
29822.m003476
I
A1O1_01197
Capronia coronata
A1O1_01197
I
A1O3_08778
Capronia epimyces
A1O3_08778
I
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
AACERI_AaceriADL310W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL310W
I
ACEP19638
Atta cephalotes
ACEP19638
I
AGOS_ADL310W
Ashbya gossypii
AGOS_ADL310W
I
AMTR_s00078p00107740
Amborella trichopoda
AMTR_s00078p00107740
I
SSRP1
Arabidopsis thaliana
AT3G28730
I
BATDEDRAFT_89692
Batrachochytrium dendrobatidis
BATDEDRAFT_89692
I
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
Bostr.0556s0524
Boechera stricta
Bostr.0556s0524
I
Bra033055
Brassica rapa
Bra033055
N
Cagra.0535s0005
Capsella grandiflora
Cagra.0535s0005
I
Carubv10016819m.g
Capsella rubella
Carubv10016819m.g
I
cassava42041.valid.m1
Manihot esculenta
cassava42041.valid.m1
I
Ca_10804
Cicer arietinum
Ca_10804
I
Ca_12487
Cicer arietinum
Ca_12487
I
chr2.CM0225.40.nc
Lotus japonicus
chr2.CM0225.40.nc
I
Ciclev10011266m.g
Citrus clementina
Ciclev10011266m.g
I
Cla017295
Citrullus lanatus
Cla017295
I
CNF04730
Cryptococcus neoformans
CNF04730
I
CORT_0E02670
Candida orthopsilosis
CORT_0E02670
I
CPAG_02417
Candida parapsilosis
CPAG_02417
I
CPUR_04901
Claviceps purpurea
CPUR_04901
I
Cucsa.339070
Cucumis sativus
Cucsa.339070
I
D918_05288
Trichuris suis
D918_05288
N
nhp6
Dictyostelium discoideum
DDB_G0270260
N
DICSQDRAFT_109066
Dichomitus squalens
DICSQDRAFT_109066
I
DRE_02237
Drechslerella stenobrocha
DRE_02237
N
Ecym_7459
Eremothecium cymbalariae
Ecym_7459
I
EFA82179.1
Polysphondylium pallidum
EFA82179.1
I
EFV62220
Trichinella spiralis
EFV62220
N
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
hmgb2a
Danio rerio
ENSDARG00000029722
N
ssrp1a
Danio rerio
ENSDARG00000037397
I
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
ENSOANG00000000353
Ornithorhynchus anatinus
ENSOANG00000000353
N
ENSXMAG00000000362
Xiphophorus maculatus
ENSXMAG00000000362
I
estExt_fgenesh1_pm.C_130068
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pm.C_130068
I
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
estExt_fgeneshPB_pg.C_360007
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_360007
I
estExt_Genewise1.C_130158
Chlorella vulgaris
estExt_Genewise1.C_130158
I
Eucgr.I01920
Eucalyptus grandis
Eucgr.I01920
N
EV44_g2383
Erysiphe necator
EV44_g2383
I
evm.TU.supercontig_211.6
Carica papaya
evm.TU.supercontig_211.6
I
fgenesh1_pg.C_scaffold_9000255
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_9000255
I
fgeneshDP_kg.C_scaffold_625000001
Dictyostelium purpureum
fgeneshDP_kg.C_scaffold_625000001
I
fgeneshDP_kg.C_scaffold_93000006
Dictyostelium purpureum
fgeneshDP_kg.C_scaffold_93000006
I
G647_10093
Cladophialophora carrionii
G647_10093
I
gene01264-v1.0-hybrid
Fragaria vesca
gene01264-v1.0-hybrid
I
gene01265-v1.0-hybrid
Fragaria vesca
gene01265-v1.0-hybrid
I
GLYMA01G33240
Glycine max
GLYMA01G33240
I
GLYMA03G03771
Glycine max
GLYMA03G03771
N
GLYMA13G05140
Glycine max
GLYMA13G05140
I
GNLVRS01_PISO0N04523g
Millerozyma farinosa
GNLVRS01_PISO0N04523g
I
Gorai.006G024900
Gossypium raimondii
Gorai.006G024900
I
Gorai.007G078500
Gossypium raimondii
Gorai.007G078500
N
GSMUA_Achr2G19630_001
Musa acuminata
GSMUA_Achr2G19630_001
I
gw1.199.74.1
Physcomitrella patens
gw1.199.74.1
I
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
HMPREF1541_06859
Cyphellophora europaea
HMPREF1541_06859
I
Kpol_1065p34
Vanderwaltozyma polyspora
Kpol_1065p34
I
Kpol_376p1
Vanderwaltozyma polyspora
Kpol_376p1
I
L596_g21045
Steinernema carpocapsae
L596_g21045
I
L804_02852
Cryptococcus gattii
L804_02852
I
L892_g13433
Steinernema scapterisci
L892_g13433
I
LjSGA_094514.1
Lotus japonicus
LjSGA_094514.1
I
M7I_1578
Glarea lozoyensis
M7I_1578
I
MBM_02410
Marssonina brunnea
MBM_02410
I
MDP0000301546
Malus domestica
MDP0000301546
I
MDP0000310093
Malus domestica
MDP0000310093
I
MDP0000828844
Malus domestica
MDP0000828844
I
MELLADRAFT_31192
Melampsora laricipopulina
MELLADRAFT_31192
I
mgf001267m
Mimulus guttatus
mgf001267m
I
mgf006762m
Mimulus guttatus
mgf006762m
N
mgf024995m
Mimulus guttatus
mgf024995m
I
MTR_1g022345
Medicago truncatula
MTR_1g022345
I
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
NCLIV_043670
Neospora caninum
NCLIV_043670
I
NCU02819
Neurospora crassa
NCU02819
D
NDAI_0A05290
Naumovozyma dairenensis
NDAI_0A05290
I
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
Ocbimv22012197m.g
Octopus bimaculoides
Ocbimv22012197m.g
I
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
orange1.1g006512m.g
Citrus sinensis
orange1.1g006512m.g
I
PDK_20s1437671g003
Phoenix dactylifera
PDK_20s1437671g003
I
PGSC0003DMG400001414
Solanum tuberosum
PGSC0003DMG400001414
I
PGSC0003DMG400018099
Solanum tuberosum
PGSC0003DMG400018099
I
PK18077.1
Cannabis sativa
PK18077.1
I
Pm015842
Prunus mume
Pm015842
I
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
POPTR_0004s12290
Populus trichocarpa
POPTR_0004s12290
I
POPTR_0017s11460
Populus trichocarpa
POPTR_0017s11460
I
PRUPE_ppa002690mg
Prunus persica
PRUPE_ppa002690mg
I
PV05_09944
Exophiala xenobiotica
PV05_09944
I
PV06_04154
Exophiala oligosperma
PV06_04154
I
PV11_09703
Exophiala sideris
PV11_09703
I
RO3G_07751
Rhizopus oryzae
RO3G_07751
I
SapurV1A.0447s0140
Salix purpurea
SapurV1A.0447s0140
I
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
ATHMG
Arabidopsis lyrata
scaffold_500854.1
I
SELMODRAFT_159743
Selaginella moellendorffii
SELMODRAFT_159743
I
SELMODRAFT_166865
Selaginella moellendorffii
SELMODRAFT_166865
I
SJAG_03603
Schizosaccharomyces japonicus
SJAG_03603
I
SMAC_00615
Sordaria macrospora
SMAC_00615
I
SOCG_02294
Schizosaccharomyces octosporus
SOCG_02294
I
Solyc02g087710.2
Solanum lycopersicum
Solyc02g087710.2
I
nhp6
Schizosaccharomyces pombe
SPAC57A10.09c
I
SPOG_00531
Schizosaccharomyces cryophilus
SPOG_00531
I
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
TCM_014800
Theobroma cacao
TCM_014800
N
TCM_018380
Theobroma cacao
TCM_018380
I
TGME49_010410
Toxoplasma gondii
TGME49_010410
I
Thhalv10003803m.g
Eutrema salsugineum
Thhalv10003803m.g
I
THITE_2121767
Thielavia terrestris
THITE_2121767
I
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
TPHA_0A03740
Tetrapisispora phaffii
TPHA_0A03740
I
TPHA_0M01480
Tetrapisispora phaffii
TPHA_0M01480
I
ATHMG
Vitis vinifera
VIT_14s0108g00040
I
YALI0_C11671g
Yarrowia lipolytica
YALI0_C11671g
I
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I