TCM_014800 (Theobroma cacao)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 TCM_014800 T332826_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY22710 Sox 189 250

Links

Other Sox family TFs
Other Theobroma cacao TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf006762m Mimulus guttatus mgf006762m N 0.669
gene21411-v1.0-hybrid Fragaria vesca gene21411-v1.0-hybrid N 0.602
L596_g21045 Steinernema carpocapsae L596_g21045 I 0.484
L892_g13433 Steinernema scapterisci L892_g13433 I 0.481
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.474
HelroG72245 Helobdella robusta HelroG72245 N 0.464
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.461
ENSOGAG00000011763 Otolemur garnettii ENSOGAG00000011763 N 0.460
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.455
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.451
EFV62220 Trichinella spiralis EFV62220 N 0.451
CRE28315 Caenorhabditis remanei CRE28315 N 0.450
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.450
D918_05288 Trichuris suis D918_05288 N 0.446
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.446
RO3G_07751 Rhizopus oryzae RO3G_07751 I 0.443
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.439
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.439
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.439
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.439
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.439
CJA17191 Caenorhabditis japonica CJA17191 N 0.437
GUITHDRAFT_73008 Guillardia theta GUITHDRAFT_73008 N 0.431
NECAME_06830 Necator americanus NECAME_06830 N 0.431
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.431
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.430
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I 0.429
ACEP19638 Atta cephalotes ACEP19638 I 0.424
BTMF_0001006201 Brugia timori BTMF_0001006201 I 0.424
hmgb2a Danio rerio ENSDARG00000029722 N 0.423
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.422
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.422
Bm2393 Brugia malayi Bm2393 N 0.422
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.422
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.422
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.422
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.422
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.422
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.422
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.420
GLYMA01G33240 Glycine max GLYMA01G33240 I 0.420
SELMODRAFT_8183 Selaginella moellendorffii SELMODRAFT_8183 I 0.420
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.419
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.418
D917_05048 Trichinella nativa D917_05048 N 0.418
EFV56090 Trichinella spiralis EFV56090 N 0.418
D917_05046 Trichinella nativa D917_05046 N 0.418
EFV56095 Trichinella spiralis EFV56095 N 0.418
D918_06015 Trichuris suis D918_06015 N 0.418
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.418
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.418
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.417
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.416
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.416
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.416
Eucgr.I01920 Eucalyptus grandis Eucgr.I01920 N 0.415