GA11715 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0071765 T114658_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.825 0.991
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.825 0.991
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.825 0.991
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.788 0.921
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.788 0.921
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.788 0.921
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.788 0.921
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.767 0.807
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.767 0.807
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.767 0.807
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.767 0.807
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.758 0.789
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.758 0.789
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.758 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0286552 C2H2 ZF 444 466
FBpp0286552 C2H2 ZF 475 497
FBpp0286552 C2H2 ZF 501 523
FBpp0286552 C2H2 ZF 529 551
FBpp0286552 C2H2 ZF 557 578

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL005176 Aedes aegypti AAEL005176 I 0.786
AAEL009230 Aedes aegypti AAEL009230 I 0.786
AAEL014359 Aedes aegypti AAEL014359 I 0.786
AATE010651 Anopheles atroparvus AATE010651 I 0.795
AATE020159 Anopheles atroparvus AATE020159 I 0.786
ACHR010032 Anopheles christyi ACHR010032 I 0.786
ACOM031677 Anopheles coluzzii ACOM031677 I 0.795
ACOM031685 Anopheles coluzzii ACOM031685 I 0.786
ACUA003488 Anopheles culicifacies ACUA003488 I 0.795
ACUA020861 Anopheles culicifacies ACUA020861 I 0.795
ACUA022497 Anopheles culicifacies ACUA022497 I 0.786
ACYPI004643 Acyrthosiphon pisum ACYPI004643 I 0.770
AFAF007486 Anopheles farauti AFAF007486 I 0.786
AFAF017001 Anopheles farauti AFAF017001 I 0.795
AFUN001835 Anopheles funestus AFUN001835 I 0.795
AFUN002786 Anopheles funestus AFUN002786 I 0.786
AGAP006791 Anopheles gambiae AGAP006791 I 0.786
AGAP006794 Anopheles gambiae AGAP006794 I 0.795
AMEC013076 Anopheles melas AMEC013076 I 0.786
AMEC015586 Anopheles melas AMEC015586 I 0.795
AMEM013788 Anopheles merus AMEM013788 I 0.786
AMEM017035 Anopheles merus AMEM017035 I 0.795
AQUA003879 Anopheles quadriannulatus AQUA003879 I 0.786
ASIS012063 Anopheles sinensis ASIS012063 I 0.795
ASIS022059 Anopheles sinensis ASIS022059 I 0.786
ASTEI08595 Anopheles stephensi ASTEI08595 I 0.795
A_07725 Schistosoma haematobium A_07725 I 0.761
BGIBMGA000607 Bombyx mori BGIBMGA000607 I 0.766
CapteG149623 Capitella teleta CapteG149623 I 0.758
CapteG176021 Capitella teleta CapteG176021 I 0.758
CapteG223614 Capitella teleta CapteG223614 I 0.766
CapteG76620 Capitella teleta CapteG76620 I 0.758
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.783
CGI_10023711 Crassostrea gigas CGI_10023711 I 0.780
CLEC001353 Cimex lectularius CLEC001353 I 0.778
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I 0.787
CPIJ004535 Culex quinquefasciatus CPIJ004535 I 0.795
CPIJ017517 Culex quinquefasciatus CPIJ017517 I 0.786
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I 0.795
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I 0.786
csin111588 Clonorchis sinensis csin111588 I 0.759
D915_06717 Fasciola hepatica D915_06717 I 0.761
D917_06340 Trichinella nativa D917_06340 I 0.761
D918_03987 Trichuris suis D918_03987 I 0.765
DAPPUDRAFT_14328 Daphnia pulex DAPPUDRAFT_14328 I 0.756
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I 0.761
EFV52761 Trichinella spiralis EFV52761 I 0.761
SCRT2 Anolis carolinensis ENSACAG00000016109 I 0.785
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I 0.767
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I 0.788
ENSAMXG00000018604 Astyanax mexicanus ENSAMXG00000018604 I 0.788
ENSAMXG00000018733 Astyanax mexicanus ENSAMXG00000018733 I 0.788
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I 0.783
SCRT1 Bos taurus ENSBTAG00000046208 I 0.767
SCRT2 Callithrix jacchus ENSCJAG00000020870 I 0.758
SCRT1 Callithrix jacchus ENSCJAG00000021406 I 0.767
SCRT2 Cavia porcellus ENSCPOG00000008447 I 0.758
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I 0.767
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I 0.767
ENSCSAG00000010473 Chlorocebus sabaeus ENSCSAG00000010473 I 0.758
scrt1b Danio rerio ENSDARG00000040214 I 0.790
scrt2 Danio rerio ENSDARG00000056175 I 0.786
scrt1a Danio rerio ENSDARG00000100821 I 0.790
SCRT2 Dasypus novemcinctus ENSDNOG00000002583 I 0.758
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I 0.767
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I 0.785
SCRT2 Felis catus ENSFCAG00000010922 I 0.758
SCRT2 Homo sapiens ENSG00000215397 D 0.758
SCRT1 Homo sapiens ENSG00000261678 D 0.767
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I 0.790
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I 0.785
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I 0.786
SCRT2 Gallus gallus ENSGALG00000028912 I 0.785
SCRT1 Gorilla gorilla ENSGGOG00000013612 I 0.767
ENSGGOG00000015228 Gorilla gorilla ENSGGOG00000015228 I 0.758
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I 0.788
ENSGMOG00000019519 Gadus morhua ENSGMOG00000019519 I 0.788
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I 0.790
SCRT2 Loxodonta africana ENSLAFG00000030340 I 0.758
SCRT1 Loxodonta africana ENSLAFG00000031587 I 0.767
ENSLOCG00000002246 Lepisosteus oculatus ENSLOCG00000002246 I 0.793
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I 0.790
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I 0.776
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I 0.785
ENSMMUG00000017354 Macaca mulatta ENSMMUG00000017354 I 0.758
SCRT1 Macaca mulatta ENSMMUG00000028886 I 0.766
SCRT2 Monodelphis domestica ENSMODG00000019528 I 0.776
Scrt1 Mus musculus ENSMUSG00000048385 I 0.767
Scrt2 Mus musculus ENSMUSG00000060257 I 0.758
ENSNLEG00000009420 Nomascus leucogenys ENSNLEG00000009420 I 0.758
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I 0.767
SCRT1 Otolemur garnettii ENSOGAG00000026538 I 0.767
SCRT2 Otolemur garnettii ENSOGAG00000031187 I 0.758
ENSONIG00000003152 Oreochromis niloticus ENSONIG00000003152 I 0.788
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I 0.786
ENSONIG00000016758 Oreochromis niloticus ENSONIG00000016758 I 0.786
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I 0.790
scrt1b Oryzias latipes ENSORLG00000008641 I 0.788
scrt2 Oryzias latipes ENSORLG00000015072 I 0.788
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I 0.767
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I 0.790
ENSPFOG00000007738 Poecilia formosa ENSPFOG00000007738 I 0.788
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I 0.788
Scrt2 Rattus norvegicus ENSRNOG00000005148 I 0.758
Scrt1 Rattus norvegicus ENSRNOG00000025594 I 0.767
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I 0.766
SCRT1 Sus scrofa ENSSSCG00000025879 I 0.767
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I 0.767
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I 0.785
scrt2 Tetraodon nigroviridis ENSTNIG00000012473 I 0.788
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I 0.788
scrt2 Takifugu rubripes ENSTRUG00000007620 I 0.788
scrt1b Takifugu rubripes ENSTRUG00000011637 I 0.788
SCRT1 Takifugu rubripes ENSTRUG00000012719 I 0.790
SCRT2 Tursiops truncatus ENSTTRG00000007039 I 0.758
ENSXMAG00000011590 Xiphophorus maculatus ENSXMAG00000011590 I 0.788
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I 0.788
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I 0.790
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I 0.773
scrt Drosophila melanogaster FBgn0004880 D 0.788
CG12605 Drosophila melanogaster FBgn0035481 D 0.825
GF24781 Drosophila ananassae FBgn0101774 I 0.825
GF25020 Drosophila ananassae FBgn0102012 I 0.788
GG14232 Drosophila erecta FBgn0106493 I 0.825
GG15174 Drosophila erecta FBgn0107427 I 0.788
GH15771 Drosophila grimshawi FBgn0123242 I 0.788
GI12551 Drosophila mojavensis FBgn0135308 I 0.788
GI12763 Drosophila mojavensis FBgn0135520 I 0.813
GM11368 Drosophila sechellia FBgn0166311 I 0.788
GM14024 Drosophila sechellia FBgn0168953 I 0.825
GM14603 Drosophila sechellia FBgn0169524 I 0.788
GD13304 Drosophila simulans FBgn0185023 I 0.825
GD13305 Drosophila simulans FBgn0185024 I 0.825
GD13794 Drosophila simulans FBgn0185494 I 0.788
GJ16103 Drosophila virilis FBgn0203288 I 0.788
GJ16104 Drosophila virilis FBgn0203289 I 0.813
GK16692 Drosophila willistoni FBgn0218694 I 0.827
GK17507 Drosophila willistoni FBgn0219506 I 0.788
GE20660 Drosophila yakuba FBgn0237965 I 0.825
GE21392 Drosophila yakuba FBgn0238652 I 0.788
HHAL001092-PA Halyomorpha halys HHAL001092-PA I 0.778
HHAL001095-PA Halyomorpha halys HHAL001095-PA I 0.778
HMEL014701 Heliconius melpomene HMEL014701 I 0.766
ISCW021315 Ixodes scapularis ISCW021315 I 0.776
KGM_21493 Danaus plexippus KGM_21493 I 0.766
L798_11766 Zootermopsis nevadensis L798_11766 I 0.778
LCUP005777 Lucilia cuprina LCUP005777 I 0.812
LCUP005780 Lucilia cuprina LCUP005780 I 0.788
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.786
MCINX009925 Melitaea cinxia MCINX009925 I 0.766
MDOA001622 Musca domestica MDOA001622 I 0.810
MDOA005810 Musca domestica MDOA005810 I 0.788
MESCA005876 Megaselia scalaris MESCA005876 I 0.785
NEMVEDRAFT_v1g108258 Nematostella vectensis NEMVEDRAFT_v1g108258 I 0.773
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I 0.778
Ogr05737 Ophisaurus gracilis Ogr05737 I 0.778
PHUM474050 Pediculus humanus PHUM474050 I 0.766
PHUM474180 Pediculus humanus PHUM474180 I 0.776
PPAI000594 Phlebotomus papatasi PPAI000594 I 0.786
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I 0.761
Pvit_17685 Pogona vitticeps Pvit_17685 I 0.776
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I 0.759
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I 0.763
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I 0.788
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I 0.761
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I 0.761
SMAR010760 Strigamia maritima SMAR010760 I 0.788
Smp_054430 Schistosoma mansoni Smp_054430 I 0.761
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I 0.761
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I 0.761
SMU15013927 Schmidtea mediterranea SMU15013927 I 0.763
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I 0.761
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I 0.793
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I 0.761
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I 0.761
T265_09545 Opisthorchis viverrini T265_09545 I 0.759
tetur08g05890 Tetranychus urticae tetur08g05890 I 0.780
TMUE_s0027002700 Trichuris muris TMUE_s0027002700 I 0.765
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I 0.761
TriadG20314 Trichoplax adhaerens TriadG20314 I 0.760
TTRE_0000441701 Trichuris trichiura TTRE_0000441701 I 0.765
scrt2 Xenopus tropicalis XB-GENE-5995512 I 0.788