D918_03987 (Trichuris suis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 D918_03987 T152939_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.776 0.816
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.776 0.816
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.776 0.816
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.776 0.816
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.765 0.798
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.765 0.798
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.765 0.798
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.761 0.833
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.761 0.833
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.761 0.833
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.759 0.825
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.759 0.825
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.759 0.825
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.759 0.825
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D918_03987 C2H2 ZF 255 277
D918_03987 C2H2 ZF 286 308
D918_03987 C2H2 ZF 312 334
D918_03987 C2H2 ZF 340 362
D918_03987 C2H2 ZF 368 389

Links

Other C2H2 ZF family TFs
Other Trichuris suis TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL005176 Aedes aegypti AAEL005176 I 0.774
AAEL009230 Aedes aegypti AAEL009230 I 0.763
AAEL014359 Aedes aegypti AAEL014359 I 0.763
AATE010651 Anopheles atroparvus AATE010651 I 0.763
AATE020159 Anopheles atroparvus AATE020159 I 0.774
ACHR010032 Anopheles christyi ACHR010032 I 0.774
ACOM031677 Anopheles coluzzii ACOM031677 I 0.763
ACOM031685 Anopheles coluzzii ACOM031685 I 0.774
ACUA003488 Anopheles culicifacies ACUA003488 I 0.763
ACUA020861 Anopheles culicifacies ACUA020861 I 0.763
ACUA022497 Anopheles culicifacies ACUA022497 I 0.774
ACYPI004643 Acyrthosiphon pisum ACYPI004643 I 0.765
AFAF007486 Anopheles farauti AFAF007486 I 0.774
AFAF017001 Anopheles farauti AFAF017001 I 0.763
AFUN001835 Anopheles funestus AFUN001835 I 0.763
AFUN002786 Anopheles funestus AFUN002786 I 0.774
AGAP006791 Anopheles gambiae AGAP006791 I 0.774
AGAP006794 Anopheles gambiae AGAP006794 I 0.763
ALUE_0002049001 Ascaris lumbricoides ALUE_0002049001 I 0.768
AMEC013076 Anopheles melas AMEC013076 I 0.774
AMEC015586 Anopheles melas AMEC015586 I 0.763
AMEM013788 Anopheles merus AMEM013788 I 0.774
AMEM017035 Anopheles merus AMEM017035 I 0.763
AQUA003879 Anopheles quadriannulatus AQUA003879 I 0.774
ASIS012063 Anopheles sinensis ASIS012063 I 0.763
ASIS022059 Anopheles sinensis ASIS022059 I 0.774
ASTEI08595 Anopheles stephensi ASTEI08595 I 0.763
A_07725 Schistosoma haematobium A_07725 I 0.777
BGIBMGA000607 Bombyx mori BGIBMGA000607 I 0.765
CapteG149623 Capitella teleta CapteG149623 I 0.777
CapteG176021 Capitella teleta CapteG176021 I 0.769
CapteG223614 Capitella teleta CapteG223614 I 0.784
CapteG76620 Capitella teleta CapteG76620 I 0.769
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.774
CGI_10023711 Crassostrea gigas CGI_10023711 I 0.800
CLEC001353 Cimex lectularius CLEC001353 I 0.774
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I 0.779
CPIJ004535 Culex quinquefasciatus CPIJ004535 I 0.763
CPIJ017517 Culex quinquefasciatus CPIJ017517 I 0.774
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I 0.763
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I 0.774
csin111588 Clonorchis sinensis csin111588 I 0.773
D915_06717 Fasciola hepatica D915_06717 I 0.773
D917_06340 Trichinella nativa D917_06340 I 0.801
DAPPUDRAFT_14328 Daphnia pulex DAPPUDRAFT_14328 I 0.765
DME_0000421901 Dracunculus medinensis DME_0000421901 I 0.763
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I 0.773
EFV52761 Trichinella spiralis EFV52761 I 0.801
SCRT2 Anolis carolinensis ENSACAG00000016109 I 0.781
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I 0.759
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I 0.790
ENSAMXG00000018604 Astyanax mexicanus ENSAMXG00000018604 I 0.759
ENSAMXG00000018733 Astyanax mexicanus ENSAMXG00000018733 I 0.771
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I 0.788
SCRT1 Bos taurus ENSBTAG00000046208 I 0.759
SCRT2 Callithrix jacchus ENSCJAG00000020870 I 0.761
SCRT1 Callithrix jacchus ENSCJAG00000021406 I 0.759
SCRT2 Cavia porcellus ENSCPOG00000008447 I 0.761
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I 0.759
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I 0.759
ENSCSAG00000010473 Chlorocebus sabaeus ENSCSAG00000010473 I 0.761
scrt1b Danio rerio ENSDARG00000040214 I 0.793
scrt2 Danio rerio ENSDARG00000056175 I 0.771
scrt1a Danio rerio ENSDARG00000100821 I 0.793
SCRT2 Dasypus novemcinctus ENSDNOG00000002583 I 0.761
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I 0.759
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I 0.781
SCRT2 Felis catus ENSFCAG00000010922 I 0.761
SCRT2 Homo sapiens ENSG00000215397 D 0.761
SCRT1 Homo sapiens ENSG00000261678 D 0.759
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I 0.788
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I 0.788
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I 0.761
SCRT2 Gallus gallus ENSGALG00000028912 I 0.779
SCRT1 Gorilla gorilla ENSGGOG00000013612 I 0.759
ENSGGOG00000015228 Gorilla gorilla ENSGGOG00000015228 I 0.761
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I 0.790
ENSGMOG00000019519 Gadus morhua ENSGMOG00000019519 I 0.761
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I 0.793
SCRT2 Loxodonta africana ENSLAFG00000030340 I 0.761
SCRT1 Loxodonta africana ENSLAFG00000031587 I 0.759
ENSLOCG00000002246 Lepisosteus oculatus ENSLOCG00000002246 I 0.767
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I 0.793
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I 0.769
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I 0.779
ENSMMUG00000017354 Macaca mulatta ENSMMUG00000017354 I 0.761
SCRT1 Macaca mulatta ENSMMUG00000028886 I 0.759
SCRT2 Monodelphis domestica ENSMODG00000019528 I 0.769
Scrt1 Mus musculus ENSMUSG00000048385 I 0.759
Scrt2 Mus musculus ENSMUSG00000060257 I 0.761
ENSNLEG00000009420 Nomascus leucogenys ENSNLEG00000009420 I 0.761
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I 0.759
SCRT1 Otolemur garnettii ENSOGAG00000026538 I 0.759
SCRT2 Otolemur garnettii ENSOGAG00000031187 I 0.761
ENSONIG00000003152 Oreochromis niloticus ENSONIG00000003152 I 0.761
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I 0.790
ENSONIG00000016758 Oreochromis niloticus ENSONIG00000016758 I 0.771
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I 0.788
scrt1b Oryzias latipes ENSORLG00000008641 I 0.790
scrt2 Oryzias latipes ENSORLG00000015072 I 0.771
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I 0.759
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I 0.788
ENSPFOG00000007738 Poecilia formosa ENSPFOG00000007738 I 0.771
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I 0.790
Scrt2 Rattus norvegicus ENSRNOG00000005148 I 0.761
Scrt1 Rattus norvegicus ENSRNOG00000025594 I 0.759
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I 0.759
SCRT1 Sus scrofa ENSSSCG00000025879 I 0.759
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I 0.759
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I 0.779
scrt2 Tetraodon nigroviridis ENSTNIG00000012473 I 0.771
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I 0.790
scrt2 Takifugu rubripes ENSTRUG00000007620 I 0.771
scrt1b Takifugu rubripes ENSTRUG00000011637 I 0.790
SCRT1 Takifugu rubripes ENSTRUG00000012719 I 0.788
SCRT2 Tursiops truncatus ENSTTRG00000007039 I 0.761
ENSXMAG00000011590 Xiphophorus maculatus ENSXMAG00000011590 I 0.771
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I 0.790
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I 0.788
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I 0.791
EVEC_0000710001 Enterobius vermicularis EVEC_0000710001 I 0.770
scrt Drosophila melanogaster FBgn0004880 D 0.776
CG12605 Drosophila melanogaster FBgn0035481 D 0.765
GA11715 Drosophila pseudoobscura FBgn0071765 I 0.765
GF24781 Drosophila ananassae FBgn0101774 I 0.765
GF25020 Drosophila ananassae FBgn0102012 I 0.776
GG14232 Drosophila erecta FBgn0106493 I 0.765
GG15174 Drosophila erecta FBgn0107427 I 0.776
GH15771 Drosophila grimshawi FBgn0123242 I 0.776
GI12551 Drosophila mojavensis FBgn0135308 I 0.776
GI12763 Drosophila mojavensis FBgn0135520 I 0.763
GM11368 Drosophila sechellia FBgn0166311 I 0.776
GM14024 Drosophila sechellia FBgn0168953 I 0.765
GM14603 Drosophila sechellia FBgn0169524 I 0.776
GD13304 Drosophila simulans FBgn0185023 I 0.765
GD13305 Drosophila simulans FBgn0185024 I 0.765
GD13794 Drosophila simulans FBgn0185494 I 0.776
GJ16103 Drosophila virilis FBgn0203288 I 0.776
GJ16104 Drosophila virilis FBgn0203289 I 0.763
GK16692 Drosophila willistoni FBgn0218694 I 0.765
GK17507 Drosophila willistoni FBgn0219506 I 0.776
GE20660 Drosophila yakuba FBgn0237965 I 0.765
GE21392 Drosophila yakuba FBgn0238652 I 0.776
HHAL001092-PA Halyomorpha halys HHAL001092-PA I 0.774
HHAL001095-PA Halyomorpha halys HHAL001095-PA I 0.765
HMEL014701 Heliconius melpomene HMEL014701 I 0.765
ISCW021315 Ixodes scapularis ISCW021315 I 0.776
KGM_21493 Danaus plexippus KGM_21493 I 0.765
L596_g15116 Steinernema carpocapsae L596_g15116 I 0.761
L798_11766 Zootermopsis nevadensis L798_11766 I 0.774
L889_g21793 Steinernema feltiae L889_g21793 I 0.759
L892_g9690 Steinernema scapterisci L892_g9690 I 0.761
L893_g27175 Steinernema glaseri L893_g27175 I 0.759
L898_g5709 Steinernema monticolum L898_g5709 I 0.759
LCUP005780 Lucilia cuprina LCUP005780 I 0.776
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.774
LotgiG58520 Lottia gigantea LotgiG58520 I 0.763
MCINX009925 Melitaea cinxia MCINX009925 I 0.765
MDOA005810 Musca domestica MDOA005810 I 0.776
nRc.2.0.1.g22231 Romanomermis culicivorax nRc.2.0.1.g22231 I 0.769
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I 0.798
Ogr05737 Ophisaurus gracilis Ogr05737 I 0.767
PHUM474050 Pediculus humanus PHUM474050 I 0.758
PHUM474180 Pediculus humanus PHUM474180 I 0.774
PPAI000594 Phlebotomus papatasi PPAI000594 I 0.765
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I 0.774
Pvit_17685 Pogona vitticeps Pvit_17685 I 0.771
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I 0.763
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I 0.775
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I 0.773
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I 0.777
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I 0.775
SMAR010760 Strigamia maritima SMAR010760 I 0.788
Smp_054430 Schistosoma mansoni Smp_054430 I 0.777
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I 0.777
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I 0.777
SMU15013927 Schmidtea mediterranea SMU15013927 I 0.773
SMUV_0000843501 Syphacia muris SMUV_0000843501 I 0.770
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I 0.772
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I 0.779
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I 0.774
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I 0.772
T265_09545 Opisthorchis viverrini T265_09545 I 0.773
TCNE_0000669301 Toxocara canis TCNE_0000669301 I 0.765
tetur08g05890 Tetranychus urticae tetur08g05890 I 0.776
TMUE_s0027002700 Trichuris muris TMUE_s0027002700 I 0.827
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I 0.777
TTRE_0000441701 Trichuris trichiura TTRE_0000441701 I 0.827
scrt2 Xenopus tropicalis XB-GENE-5995512 I 0.779