RBPJ (Cavia porcellus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSCPOG00000007041 T166038_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.937 0.937
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.937 0.937
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.937 0.937
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.937 0.937
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.937 0.937
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.937 0.937
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.937 0.937
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.937 0.937
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.937 0.937
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.937 0.937
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.937 0.937
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.937 0.937
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.937 0.937
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.795 0.795
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.795 0.795
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000006352 CSL 16 142

Links

Other CSL family TFs
Other Cavia porcellus TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB05479 Xenopus laevis AAB05479 I 0.901
AAEL006419 Aedes aegypti AAEL006419 I 0.756
AALB007981 Anopheles albimanus AALB007981 I 0.748
Aan_R011115 Calypte anna Aan_R011115 I 0.929
AARA009493 Anopheles arabiensis AARA009493 I 0.709
AATE009298 Anopheles atroparvus AATE009298 I 0.748
ACEP17167 Atta cephalotes ACEP17167 I 0.780
ACOM040639 Anopheles coluzzii ACOM040639 I 0.748
ACUA014515 Anopheles culicifacies ACUA014515 I 0.748
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.709
ADIR011431 Anopheles dirus ADIR011431 I 0.748
AEPI005106 Anopheles epiroticus AEPI005106 I 0.701
AFAF012186 Anopheles farauti AFAF012186 I 0.748
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.929
AFUN007280 Anopheles funestus AFUN007280 I 0.748
AGAP008935 Anopheles gambiae AGAP008935 I 0.748
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.937
AMEC017285 Anopheles melas AMEC017285 I 0.709
AMEM004324 Anopheles merus AMEM004324 I 0.748
AMIN005880 Anopheles minimus AMIN005880 I 0.748
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.726
ASIS021327 Anopheles sinensis ASIS021327 I 0.709
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.740
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.780
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.929
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.762
CapteG179039 Capitella teleta CapteG179039 I 0.764
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.780
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.786
CLEC005205 Cimex lectularius CLEC005205 I 0.772
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.937
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.724
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.724
D915_08968 Fasciola hepatica D915_08968 I 0.712
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.803
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.937
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.937
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.870
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.858
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.929
RBPJ Bos taurus ENSBTAG00000003602 I 0.937
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.937
RBPJ Canis familiaris ENSCAFG00000016387 I 0.937
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.937
su(h) Ciona intestinalis ENSCING00000000838 I 0.701
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.937
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.709
rbpja Danio rerio ENSDARG00000003398 I 0.874
rbpjb Danio rerio ENSDARG00000052091 I 0.913
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.937
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.937
RBPJ Equus caballus ENSECAG00000019257 I 0.937
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.937
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.929
RBPJ Felis catus ENSFCAG00000030363 I 0.915
RBPJ Homo sapiens ENSG00000168214 D 1.000
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.835
RBPJ Gallus gallus ENSGALG00000014365 I 0.929
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.937
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.858
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.833
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.937
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.937
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.937
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.929
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.937
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.937
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.937
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.937
Rbpj Mus musculus ENSMUSG00000039191 D 0.937
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.937
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.937
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.937
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.937
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.937
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.843
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.885
rbpja Oryzias latipes ENSORLG00000004882 I 0.775
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.748
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.937
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.937
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.878
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.787
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.937
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.827
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.937
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.937
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.937
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.898
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.937
RBPJ Sorex araneus ENSSARG00000001169 I 0.937
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.937
RBPJ Sus scrofa ENSSSCG00000022155 I 0.937
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.937
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.937
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.929
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.885
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.893
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.937
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.937
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.878
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.803
Su(H) Drosophila melanogaster FBgn0004837 D 0.795
Su(H) Drosophila simulans FBgn0027417 I 0.795
GF14905 Drosophila ananassae FBgn0091930 I 0.795
GG25142 Drosophila erecta FBgn0117267 I 0.795
GH10915 Drosophila grimshawi FBgn0118396 I 0.795
GI13259 Drosophila mojavensis FBgn0136016 I 0.795
GL26026 Drosophila persimilis FBgn0163608 I 0.795
GM15894 Drosophila sechellia FBgn0170810 I 0.795
GJ11880 Drosophila virilis FBgn0199134 I 0.795
GE20814 Drosophila yakuba FBgn0238107 I 0.795
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.795
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.795
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.803
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.786
GB45655 Apis mellifera GB45655 I 0.780
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.929
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
HelroG186992 Helobdella robusta HelroG186992 I 0.724
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.756
HMEL017244 Heliconius melpomene HMEL017244 I 0.787
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.772
ISCW010197 Ixodes scapularis ISCW010197 I 0.772
KGM_08407 Danaus plexippus KGM_08407 I 0.787
L798_15068 Zootermopsis nevadensis L798_15068 I 0.780
LCUP003485 Lucilia cuprina LCUP003485 I 0.763
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.787
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.717
LotgiG159505 Lottia gigantea LotgiG159505 I 0.772
MDOA002342 Musca domestica MDOA002342 I 0.763
MESCA005881 Megaselia scalaris MESCA005881 I 0.750
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.937
NEMVEDRAFT_v1g206550 Nematostella vectensis NEMVEDRAFT_v1g206550 N 0.732
NV17858 Nasonia vitripennis NV17858 I 0.787
NV17967 Nasonia vitripennis NV17967 I 0.732
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.811
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.890
PHUM462870 Pediculus humanus PHUM462870 I 0.772
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.937
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.803
SINV15808 Solenopsis invicta SINV15808 I 0.780
SMAR001432 Strigamia maritima SMAR001432 I 0.803
Tal_R001466 Tyto alba Tal_R001466 I 0.929
TC014468 Tribolium castaneum TC014468 I 0.787
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.767
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.767
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.748
rbpj Xenopus tropicalis XB-GENE-490756 I 0.937
rbpj.S Xenopus laevis XB-GENE-865998 I 0.901
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.780