Pavir.Bb01348 (Panicum virgatum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pavir.Bb01348 T181677_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb01348.1.p FAR1 54 134

Links

Other FAR1 family TFs
Other Panicum virgatum TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27568.m000253 Ricinus communis 27568.m000253 N
29767.m000200 Ricinus communis 29767.m000200 N
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N
cassava15723.m1 Manihot esculenta cassava15723.m1 N
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N
Ca_21138 Cicer arietinum Ca_21138 N
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N
Cla018179 Citrullus lanatus Cla018179 N
Cucsa.175500 Cucumis sativus Cucsa.175500 N
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N
Eucgr.G02940 Eucalyptus grandis Eucgr.G02940 N
Eucgr.G02941 Eucalyptus grandis Eucgr.G02941 N
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N
GLYMA07G15950 Glycine max GLYMA07G15950 N
GLYMA18G39920 Glycine max GLYMA18G39920 N
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N
Lus10023404.g Linum usitatissimum Lus10023404.g N
Lus10024384.g Linum usitatissimum Lus10024384.g N
Lus10040284.g Linum usitatissimum Lus10040284.g N
mgf014897m Mimulus guttatus mgf014897m N
MTR_7g062120 Medicago truncatula MTR_7g062120 N
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N
PGSC0003DMG400027198 Solanum tuberosum PGSC0003DMG400027198 N
Pm002685 Prunus mume Pm002685 N
Pm018822 Prunus mume Pm018822 N
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N
XM_002316242.1 Populus trichocarpa POPTR_0010s20980 N
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N
Solyc04g011630.1 Solanum lycopersicum Solyc04g011630.1 N
Solyc05g053090.1 Solanum lycopersicum Solyc05g053090.1 N
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N
TCM_021920 Theobroma cacao TCM_021920 N
TCM_042705 Theobroma cacao TCM_042705 N
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N
VIT_13s0019g01710 Vitis vinifera VIT_13s0019g01710 N
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N