CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr6.CM0066.190.nc
(
Lotus japonicus
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
chr6.CM0066.190.nc
T182025_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr6.CM0066.190.nc
FAR1
11
96
NYYNSYAKETGFGIRVKSSWTKRHSKEKRGAVLCCNCEGFRTIKEANSHRKETRTGCLAMIRLRLVESNRWKLDEVKLEHNHSFDP
Links
Other
FAR1
family TFs
Other
Lotus japonicus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29851.m002498
Ricinus communis
29851.m002498
I
0.000
cassava29880.valid.m1
Manihot esculenta
cassava29880.valid.m1
I
0.000
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
0.000
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
0.000
Ciclev10028642m.g
Citrus clementina
Ciclev10028642m.g
I
0.000
Cla010445
Citrullus lanatus
Cla010445
I
0.000
gene31955-v1.0-hybrid
Fragaria vesca
gene31955-v1.0-hybrid
I
0.000
GLYMA07G21160
Glycine max
GLYMA07G21160
I
0.000
GLYMA20G01130
Glycine max
GLYMA20G01130
N
0.000
Gorai.002G006500
Gossypium raimondii
Gorai.002G006500
I
0.000
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
0.000
Gorai.012G150900
Gossypium raimondii
Gorai.012G150900
I
0.000
Gorai.013G040000
Gossypium raimondii
Gorai.013G040000
I
0.000
Lus10012041.g
Linum usitatissimum
Lus10012041.g
N
0.000
MDP0000238744
Malus domestica
MDP0000238744
N
0.000
orange1.1g016655m.g
Citrus sinensis
orange1.1g016655m.g
I
0.000
PK10791.1
Cannabis sativa
PK10791.1
I
0.000
Pm021537
Prunus mume
Pm021537
N
0.000
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
0.000
SapurV1A.0090s0340
Salix purpurea
SapurV1A.0090s0340
I
0.000
TCM_006971
Theobroma cacao
TCM_006971
I
0.000