CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GI12976
(
Drosophila mojavensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
FBgn0135733
T187479_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bin
M03752_2.00
Drosophila melanogaster
HTAATGTAAACAAW
WTTGTTTACATTAD
SELEX
Nitta et al.(2015)
bin_1
0.876
1.000
bin
M06199_2.00
Drosophila melanogaster
TAAACARVGA
TCBYTGTTTA
B1H
Zhu et al.(2011)
bin_FlyReg_FBgn0045759
0.876
1.000
bin
M06200_2.00
Drosophila melanogaster
RTAAACA
TGTTTAY
B1H
Zhu et al.(2011)
bin_SANGER_5_FBgn0045759
0.876
1.000
FOXF1
M10529_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.765
0.686
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.765
0.686
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN
NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.733
0.674
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN
NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.733
0.674
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.702
0.500
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.702
0.500
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW
WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.702
0.500
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN
NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.702
0.500
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH
DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.702
0.500
FOXD3
M10566_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.702
0.500
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW
WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.702
0.500
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.698
0.488
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.693
0.512
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.693
0.512
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN
NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.693
0.512
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH
DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.693
0.512
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD
HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.693
0.512
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN
NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.693
0.512
FOXD1
M10567_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.693
0.512
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN
NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.693
0.512
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD
HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.693
0.512
let-381
M00664_2.00
Caenorhabditis elegans
RTAAACAW
WTGTTTAY
PBM
Narasimhan et al.(2015)
pTH9057
0.690
0.570
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW
WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.683
0.465
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN
NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.683
0.465
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH
DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.683
0.465
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW
WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.683
0.465
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.682
0.477
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.682
0.477
FOXD4L4
M10564_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.679
0.477
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA
TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.672
0.477
FOXL1
M03034_2.00
Homo sapiens
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.672
0.465
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.672
0.465
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.672
0.465
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.671
0.453
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN
NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.671
0.465
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0162193
Forkhead
309
400
KPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLFEDEGS
Links
Other
Forkhead
family TFs
Other
Drosophila mojavensis
TFs
662 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27805.m000021
Ricinus communis
27805.m000021
I
28118.m000034
Ricinus communis
28118.m000034
I
AC198403.3_FG001
Zea mays
AC198403.3_FG001
I
AMTR_s00021p00223240
Amborella trichopoda
AMTR_s00021p00223240
I
AMTR_s00099p00039760
Amborella trichopoda
AMTR_s00099p00039760
I
ERF022
Arabidopsis thaliana
AT1G33760
I
ERF021
Arabidopsis thaliana
AT1G71450
D
BGIOSGA034227
Oryza indica
BGIOSGA034227
I
Bo2g072910
Brassica oleracea
Bo2g072910
I
Bo5g086680
Brassica oleracea
Bo5g086680
I
Bo6g046850
Brassica oleracea
Bo6g046850
I
Bo6g094210
Brassica oleracea
Bo6g094210
I
Bo6g113020
Brassica oleracea
Bo6g113020
I
Bo8g027240
Brassica oleracea
Bo8g027240
I
Bostr.10273s0203
Boechera stricta
Bostr.10273s0203
I
Bostr.3359s0006
Boechera stricta
Bostr.3359s0006
I
Bra003924
Brassica rapa
Bra003924
I
Bra007975
Brassica rapa
Bra007975
I
Bra010210
Brassica rapa
Bra010210
I
Bra016136
Brassica rapa
Bra016136
I
Bra028009
Brassica rapa
Bra028009
I
BRADI4G21265
Brachypodium distachyon
BRADI4G21265
I
Cagra.2418s0001
Capsella grandiflora
Cagra.2418s0001
I
Carubv10011715m.g
Capsella rubella
Carubv10011715m.g
I
Carubv10012215m.g
Capsella rubella
Carubv10012215m.g
I
Carubv10022349m.g
Capsella rubella
Carubv10022349m.g
I
cassava43172.valid.m1
Manihot esculenta
cassava43172.valid.m1
I
cassava45911.m1
Manihot esculenta
cassava45911.m1
I
cassava8552.m1
Manihot esculenta
cassava8552.m1
I
Ca_15064
Cicer arietinum
Ca_15064
I
chr2.CM0018.470.nd
Lotus japonicus
chr2.CM0018.470.nd
I
chr2.CM0018.610.nd
Lotus japonicus
chr2.CM0018.610.nd
I
Ciclev10023857m.g
Citrus clementina
Ciclev10023857m.g
I
Ciclev10024063m.g
Citrus clementina
Ciclev10024063m.g
I
Cla012661
Citrullus lanatus
Cla012661
I
Cla012665
Citrullus lanatus
Cla012665
I
Cucsa.237150
Cucumis sativus
Cucsa.237150
I
Cucsa.237170
Cucumis sativus
Cucsa.237170
I
Eucgr.F02974
Eucalyptus grandis
Eucgr.F02974
I
Eucgr.F02975
Eucalyptus grandis
Eucgr.F02975
I
Eucgr.F02976
Eucalyptus grandis
Eucgr.F02976
I
evm.TU.supercontig_21.69
Carica papaya
evm.TU.supercontig_21.69
I
evm.TU.supercontig_21.70
Carica papaya
evm.TU.supercontig_21.70
I
F775_17299
Aegilops tauschii
F775_17299
I
fgenesh2_kg.2__1406__AT1G71450.1
Arabidopsis lyrata
fgenesh2_kg.2__1406__AT1G71450.1
I
gene27017-v1.0-hybrid
Fragaria vesca
gene27017-v1.0-hybrid
I
gene27021-v1.0-hybrid
Fragaria vesca
gene27021-v1.0-hybrid
I
GLYMA01G44130
Glycine max
GLYMA01G44130
I
GLYMA01G44140
Glycine max
GLYMA01G44140
I
GLYMA11G01640
Glycine max
GLYMA11G01640
I
Gorai.005G116500
Gossypium raimondii
Gorai.005G116500
I
Gorai.009G266600
Gossypium raimondii
Gorai.009G266600
I
Gorai.009G266700
Gossypium raimondii
Gorai.009G266700
I
GSMUA_Achr11G12650_001
Musa acuminata
GSMUA_Achr11G12650_001
N
GSMUA_Achr2G20760_001
Musa acuminata
GSMUA_Achr2G20760_001
I
GSMUA_Achr8G16250_001
Musa acuminata
GSMUA_Achr8G16250_001
I
LPERR11G07100
Leersia perrieri
LPERR11G07100
I
Lus10002953.g
Linum usitatissimum
Lus10002953.g
I
Lus10003513.g
Linum usitatissimum
Lus10003513.g
N
Lus10006173.g
Linum usitatissimum
Lus10006173.g
I
Lus10041050.g
Linum usitatissimum
Lus10041050.g
I
Lus10041052.g
Linum usitatissimum
Lus10041052.g
N
MDP0000122739
Malus domestica
MDP0000122739
I
MDP0000122740
Malus domestica
MDP0000122740
I
MDP0000151428
Malus domestica
MDP0000151428
I
MDP0000283350
Malus domestica
MDP0000283350
I
MLOC_55144
Hordeum vulgare
MLOC_55144
I
MTR_5g008550
Medicago truncatula
MTR_5g008550
I
MTR_5g008590
Medicago truncatula
MTR_5g008590
I
OB11G16300
Oryza brachyantha
OB11G16300
I
OGLUM11G07800
Oryza glumaepatula
OGLUM11G07800
I
OMERI11G06840
Oryza meridionalis
OMERI11G06840
I
ONIVA11G08160
Oryza nivara
ONIVA11G08160
I
OPUNC11G07750
Oryza punctata
OPUNC11G07750
I
orange1.1g035756m.g
Citrus sinensis
orange1.1g035756m.g
I
orange1.1g046901m.g
Citrus sinensis
orange1.1g046901m.g
I
ORGLA11G0070000
Oryza glaberrima
ORGLA11G0070000
I
ORUFI11G08240
Oryza rufipogon
ORUFI11G08240
I
OS11G0242300
Oryza sativa
OS11G0242300
I
Pavir.J22217
Panicum virgatum
Pavir.J22217
I
Pavir.J26137
Panicum virgatum
Pavir.J26137
I
PGSC0003DMG400017813
Solanum tuberosum
PGSC0003DMG400017813
I
PGSC0003DMG400018054
Solanum tuberosum
PGSC0003DMG400018054
I
Pm004269
Prunus mume
Pm004269
I
Pm004272
Prunus mume
Pm004272
I
POPTR_0001s18180
Populus trichocarpa
POPTR_0001s18180
I
POPTR_0003s05300
Populus trichocarpa
POPTR_0003s05300
I
POPTR_0013s10330
Populus trichocarpa
POPTR_0013s10330
I
POPTR_0013s10340
Populus trichocarpa
POPTR_0013s10340
I
POPTR_0019s10430
Populus trichocarpa
POPTR_0019s10430
I
PRUPE_ppa012354mg
Prunus persica
PRUPE_ppa012354mg
I
PRUPE_ppa018178mg
Prunus persica
PRUPE_ppa018178mg
I
SapurV1A.0551s0030
Salix purpurea
SapurV1A.0551s0030
I
SapurV1A.0551s0040
Salix purpurea
SapurV1A.0551s0040
I
SapurV1A.0601s0170
Salix purpurea
SapurV1A.0601s0170
N
SapurV1A.1130s0090
Salix purpurea
SapurV1A.1130s0090
I
SapurV1A.1130s0100
Salix purpurea
SapurV1A.1130s0100
I
SapurV1A.1331s0040
Salix purpurea
SapurV1A.1331s0040
I
SapurV1A.1331s0050
Salix purpurea
SapurV1A.1331s0050
I
SapurV1A.3106s0010
Salix purpurea
SapurV1A.3106s0010
I
Sb05g007135
Sorghum bicolor
Sb05g007135
I
scaffold_103754.1
Arabidopsis lyrata
scaffold_103754.1
I
Si026882m.g
Setaria italica
Si026882m.g
I
Solyc11g042560.1
Solanum lycopersicum
Solyc11g042560.1
I
Solyc11g042580.1
Solanum lycopersicum
Solyc11g042580.1
I
TCM_036269
Theobroma cacao
TCM_036269
I
TCM_036270
Theobroma cacao
TCM_036270
I
Thhalv10010002m.g
Eutrema salsugineum
Thhalv10010002m.g
I
Thhalv10019659m.g
Eutrema salsugineum
Thhalv10019659m.g
I
Traes_2BL_9CD6E043A
Triticum aestivum
Traes_2BL_9CD6E043A
I
Traes_4AL_D2D7703821
Triticum aestivum
Traes_4AL_D2D7703821
I
Traes_4BS_DD5E68382
Triticum aestivum
Traes_4BS_DD5E68382
I
Traes_4DS_97AC77E13
Triticum aestivum
Traes_4DS_97AC77E13
I
TRIUR3_32168
Triticum urartu
TRIUR3_32168
I
TRIUR3_32331
Triticum urartu
TRIUR3_32331
I
VIT_15s0046g00310
Vitis vinifera
VIT_15s0046g00310
I
VIT_18s0001g05850
Vitis vinifera
VIT_18s0001g05850
I
VIT_18s0001g05890
Vitis vinifera
VIT_18s0001g05890
I