MSN1 (Saccharomyces cerevisiae)
GCR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF12550 (GCR1_C) IPR022210 YOL116W T198677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSN1
M00913_2.00		 Saccharomyces cerevisiae
NWWTGTCCHN
NDGGACAWWN		 PBM
Gordan et al.(2011)
Msn1		 (Direct) (Direct)
MSN1
M08567_2.00		 Saccharomyces cerevisiae
GTCCNHAT
ATDNGGAC		 Misc
DeBoer et al.(2011)
YOL116W_1376		 (Direct) (Direct)
MSN1
M08568_2.00		 Saccharomyces cerevisiae
HATGTCCH
DGGACATD		 Misc
DeBoer et al.(2011)
YOL116W_1378		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00913_2.00 GCR1 278 356

DNA Binding Domains

Protein ID Domain From To Sequence
YOL116W GCR1 278 356

Links

Other GCR1 family TFs
Other Saccharomyces cerevisiae TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28077.m000081 Ricinus communis 28077.m000081 I
29815.m000504 Ricinus communis 29815.m000504 I
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I
AT3G10030 Arabidopsis thaliana AT3G10030 D
BGIOSGA016339 Oryza indica BGIOSGA016339 I
Bo5g137800 Brassica oleracea Bo5g137800 I
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I
Bra029812 Brassica rapa Bra029812 I
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I
Ca_20148 Cicer arietinum Ca_20148 I
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I
Cla018015 Citrullus lanatus Cla018015 I
Cucsa.378670 Cucumis sativus Cucsa.378670 I
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I
F775_31501 Aegilops tauschii F775_31501 I
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I
GLYMA10G07490 Glycine max GLYMA10G07490 I
GLYMA10G34520 Glycine max GLYMA10G34520 I
GLYMA13G21371 Glycine max GLYMA13G21371 I
GLYMA20G33031 Glycine max GLYMA20G33031 I
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I
GRMZM2G002978 Zea mays GRMZM2G002978 I
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I
LPERR04G08300 Leersia perrieri LPERR04G08300 I
MDP0000201016 Malus domestica MDP0000201016 I
MDP0000399495 Malus domestica MDP0000399495 I
MDP0000415733 Malus domestica MDP0000415733 I
mgf008067m Mimulus guttatus mgf008067m I
MLOC_28975 Hordeum vulgare MLOC_28975 I
MTR_1g061600 Medicago truncatula MTR_1g061600 I
OB04G18670 Oryza brachyantha OB04G18670 I
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I
OMERI04G10080 Oryza meridionalis OMERI04G10080 I
ONIVA04G09510 Oryza nivara ONIVA04G09510 I
OPUNC04G09570 Oryza punctata OPUNC04G09570 I
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I
Pavir.J13370 Panicum virgatum Pavir.J13370 I
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I
PK04914.1 Cannabis sativa PK04914.1 D
Pm026265 Prunus mume Pm026265 I
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I
Sb06g015280 Sorghum bicolor Sb06g015280 I
SELMODRAFT_130409 Selaginella moellendorffii SELMODRAFT_130409 I
SELMODRAFT_134056 Selaginella moellendorffii SELMODRAFT_134056 I
Si009787m.g Setaria italica Si009787m.g I
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I
TCM_022397 Theobroma cacao TCM_022397 I
TCM_043551 Theobroma cacao TCM_043551 I
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I
TRIUR3_22240 Triticum urartu TRIUR3_22240 I
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I