Pavir.J23622 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J23622 T203073_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J23622.1.p GRAS 358 478

Links

Other GRAS family TFs
Other Panicum virgatum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCR Arabidopsis thaliana AT3G54220 N 0.717
Bo8g083500 Brassica oleracea Bo8g083500 N 0.717
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.717
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.717
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.717
Ca_09530 Cicer arietinum Ca_09530 N 0.758
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.767
Cla012346 Citrullus lanatus Cla012346 N 0.783
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.775
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.750
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.717
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.758
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.975
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.767
LPERR11G01210 Leersia perrieri LPERR11G01210 N 0.942
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.717
mgf012242m Mimulus guttatus mgf012242m N 0.767
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.892
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.750
OMERI06G09050 Oryza meridionalis OMERI06G09050 N 0.730
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.875
PK17372.1 Cannabis sativa PK17372.1 N 0.783
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.758
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.767
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.733
Thhalv10023455m.g Eutrema salsugineum Thhalv10023455m.g N 0.717
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.900