ENSSHAG00000015712 (Sarcophilus harrisii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSSHAG00000015712 T215713_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.783 0.533
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.783 0.533
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.783 0.533
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.722 0.378
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.722 0.378
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.722 0.378
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.722 0.378
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.722 0.378
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.722 0.378
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.722 0.378
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.722 0.378
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.722 0.378
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000018506 Homeodomain 107 151

Links

Other Homeodomain family TFs
Other Sarcophilus harrisii TFs

1234 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.000
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.000
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.000
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.000
MYB8 Arabidopsis thaliana AT1G35515 I 0.000
MYB12 Arabidopsis thaliana AT2G47460 I 0.000
MYB11 Arabidopsis thaliana AT3G62610 I 0.000
MYB111 Arabidopsis thaliana AT5G49330 D 0.000
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.000
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.000
Bo3g039690 Brassica oleracea Bo3g039690 I 0.000
Bo3g044210 Brassica oleracea Bo3g044210 I 0.000
Bo4g004500 Brassica oleracea Bo4g004500 I 0.000
Bo7g092680 Brassica oleracea Bo7g092680 I 0.000
Bostr.13129s0196 Boechera stricta Bostr.13129s0196 I 0.000
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.000
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.000
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.000
Bra000453 Brassica rapa Bra000453 I 0.000
Bra000680 Brassica rapa Bra000680 I 0.000
Bra036145 Brassica rapa Bra036145 I 0.000
Bra037419 Brassica rapa Bra037419 I 0.000
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.000
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.000
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.000
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.000
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.000
Carubv10012451m.g Capsella rubella Carubv10012451m.g I 0.000
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.000
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.000
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.000
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.000
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.000
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.000
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.000
Ca_03498 Cicer arietinum Ca_03498 I 0.000
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.000
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.000
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.000
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.000
Cla009418 Citrullus lanatus Cla009418 I 0.000
Cla017646 Citrullus lanatus Cla017646 I 0.000
Cla022107 Citrullus lanatus Cla022107 I 0.000
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.000
Cucsa.096800 Cucumis sativus Cucsa.096800 I 0.000
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.000
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.000
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.000
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.000
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.000
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.000
F775_11235 Aegilops tauschii F775_11235 I 0.000
F775_18434 Aegilops tauschii F775_18434 I 0.000
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.000
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.000
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.000
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.000
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.000
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.000
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.000
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.000
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.000
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.000
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.000
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.000
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.000
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.000
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.000
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.000
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.000
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.000
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.000
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.000
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.000
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.000
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.000
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.000
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.000
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.000
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.000
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.000
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.000
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.000
Lus10036453.g Linum usitatissimum Lus10036453.g I 0.000
MDP0000119725 Malus domestica MDP0000119725 I 0.000
MDP0000607330 Malus domestica MDP0000607330 I 0.000
mgf012733m Mimulus guttatus mgf012733m I 0.000
mgf024278m Mimulus guttatus mgf024278m I 0.000
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.000
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.000
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.000
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.000
OB01G22640 Oryza brachyantha OB01G22640 I 0.000
OB03G24320 Oryza brachyantha OB03G24320 I 0.000
OBART03G14380 Oryza barthii OBART03G14380 I 0.000
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.000
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.000
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.000
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.000
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.000
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.000
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.000
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.000
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.000
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.000
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.000
OS01G0305900 Oryza sativa OS01G0305900 I 0.000
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.000
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.000
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.000
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.000
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.000
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.000
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.000
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.000
PK06182.1 Cannabis sativa PK06182.1 D 0.000
PK16958.1 Cannabis sativa PK16958.1 I 0.000
Pm008294 Prunus mume Pm008294 I 0.000
Pm020104 Prunus mume Pm020104 I 0.000
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.000
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.000
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.000
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.000
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.000
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.000
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.000
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.000
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.000
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.000
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.000
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.000
Si002107m.g Setaria italica Si002107m.g I 0.000
Si039538m.g Setaria italica Si039538m.g I 0.000
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.000
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.000
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.000
TCM_004777 Theobroma cacao TCM_004777 I 0.000
TCM_010778 Theobroma cacao TCM_010778 I 0.000
TCM_021317 Theobroma cacao TCM_021317 I 0.000
TCM_021318 Theobroma cacao TCM_021318 I 0.000
TCM_037379 Theobroma cacao TCM_037379 I 0.000
TCM_037555 Theobroma cacao TCM_037555 I 0.000
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.000
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.000
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.000
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.000
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.000
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.000
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.000
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.000
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.000
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.000
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.000
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.000