CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI05G12600
(
Oryza rufipogon
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ORUFI05G12600
T221929_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI05G12600.1
Homeodomain
12
35
RTYTGLTDKQLQMWFCHRRLKDRK
Links
Other
Homeodomain
family TFs
Other
Oryza rufipogon
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA019617
Oryza indica
BGIOSGA019617
N
0.725
Bo9g006410
Brassica oleracea
Bo9g006410
N
0.705
BTMF_0000474601
Brugia timori
BTMF_0000474601
N
0.623
cassava31027.valid.m1
Manihot esculenta
cassava31027.valid.m1
N
0.705
D915_07707
Fasciola hepatica
D915_07707
N
0.609
DICVIV_12877
Dictyocaulus viviparus
DICVIV_12877
N
0.626
ENSDNOG00000038094
Dasypus novemcinctus
ENSDNOG00000038094
N
0.607
gene14635-v1.0-hybrid
Fragaria vesca
gene14635-v1.0-hybrid
N
0.739
GLYMA08G38930
Glycine max
GLYMA08G38930
N
0.720
Gorai.004G014700
Gossypium raimondii
Gorai.004G014700
I
0.727
Gorai.013G254100
Gossypium raimondii
Gorai.013G254100
I
0.741
GSMUA_Achr8G27210_001
Musa acuminata
GSMUA_Achr8G27210_001
N
0.731
GSMUA_Achr9G06610_001
Musa acuminata
GSMUA_Achr9G06610_001
N
0.731
LjSGA_012738.1
Lotus japonicus
LjSGA_012738.1
N
0.720
OB01G35260
Oryza brachyantha
OB01G35260
N
0.725
OBART01G26120
Oryza barthii
OBART01G26120
N
0.725
OBART05G11630
Oryza barthii
OBART05G11630
N
0.738
OESDEN_18963
Oesophagostomum dentatum
OESDEN_18963
N
0.626
OLONG_014924
Oryza longistaminata
OLONG_014924
N
0.725
ONIVA05G12010
Oryza nivara
ONIVA05G12010
N
0.725
PGSC0003DMG400004714
Solanum tuberosum
PGSC0003DMG400004714
I
0.741
Pm012761
Prunus mume
Pm012761
N
0.705
POPTR_0004s04840
Populus trichocarpa
POPTR_0004s04840
N
0.725
SapurV1A.0042s0570
Salix purpurea
SapurV1A.0042s0570
I
0.741
scaffold_603934.1
Arabidopsis lyrata
scaffold_603934.1
N
0.705
TCM_008214
Theobroma cacao
TCM_008214
I
0.813