Gorai.001G134800 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.001G134800 T228665_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.654 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G134800.1 Homeodomain 65 121
Gorai.001G134800.2 Homeodomain 65 121
Gorai.001G134800.3 Homeodomain 65 121
Gorai.001G134800.4 Homeodomain 65 121
Gorai.001G134800.5 Homeodomain 23 79

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.000
ASIM_0001132301 Anisakis simplex ASIM_0001132301 N 0.000
ASIS002444 Anopheles sinensis ASIS002444 N 0.000
AWRI1499_2837 Brettanomyces bruxellensis AWRI1499_2837 N 0.000
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.000
BN7_5943 Wickerhamomyces ciferrii BN7_5943 N 0.000
Bra012832 Brassica rapa Bra012832 N 0.000
CC1G_07855 Coprinopsis cinerea CC1G_07855 N 0.000
CMQ_7998 Grosmannia clavigera CMQ_7998 N 0.000
estExt_fgeneshTM_pg.C_10542 Tremella mesenterica estExt_fgeneshTM_pg.C_10542 N 0.000
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N 0.000
EVEC_0001251901 Enterobius vermicularis EVEC_0001251901 N 0.000
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N 0.000
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.000
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.000
HelroG178674 Helobdella robusta HelroG178674 N 0.000
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N 0.000
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N 0.000
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.000
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.000
K437DRAFT_66818 Tilletiaria anomala K437DRAFT_66818 N 0.000
KLLA0_B11495g Kluyveromyces lactis KLLA0_B11495g N 0.000
KUCA_T00004799001 Kuraishia capsulata KUCA_T00004799001 N 0.000
Kwal_9519 Kluyveromyces waltii Kwal_9519 N 0.000
LALA0_S01e08702g Lachancea lanzarotensis LALA0_S01e08702g N 0.000
LALA0_S10e00254g Lachancea lanzarotensis LALA0_S10e00254g N 0.000
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.000
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.000
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.000
M378DRAFT_41557 Amanita muscaria M378DRAFT_41557 N 0.000
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.000
MAC_03708 Metarhizium acridum MAC_03708 N 0.000
MAJ_01270 Metarhizium majus MAJ_01270 N 0.000
MAM_02299 Metarhizium album MAM_02299 N 0.000
MBR_01289 Metarhizium brunneum MBR_01289 N 0.000
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.000
Moror_8439 Moniliophthora roreri Moror_8439 N 0.000
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.000
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.000
PAS_chr1-1_0442 Komagataella pastoris PAS_chr1-1_0442 N 0.000
PAS_chr3_1149 Komagataella pastoris PAS_chr3_1149 N 0.000
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.000
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.000
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.000
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.000
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.000
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.000
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.000
SAKL0H00726g Lachancea kluyveri SAKL0H00726g N 0.000
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.000
SINV25043 Solenopsis invicta SINV25043 N 0.000
sr12520 Sporisorium reilianum sr12520 N 0.000
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.000
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.000
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.000
UM01457 Ustilago maydis UM01457 N 0.000
X797_001779 Metarhizium robertsii X797_001779 N 0.000
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.000
XP_002492281.1 Pichia pastoris XP_002492281.1 N 0.000