LLOJ006146 (Lutzomyia longipalpis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LLOJ006146 T232509_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.634 0.250
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.634 0.250
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.634 0.250
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.634 0.250
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.634 0.250
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.634 0.250
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.634 0.250
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.634 0.250
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.634 0.250
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.619 0.396
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.619 0.396
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.619 0.396
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LLOJ006146-PA Homeodomain 259 306

Links

Other Homeodomain family TFs
Other Lutzomyia longipalpis TFs

1015 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0891s0022 Capsella grandiflora Cagra.0891s0022 N
Carubv10026947m.g Capsella rubella Carubv10026947m.g N
Ca_15677 Cicer arietinum Ca_15677 N
Ciclev10002972m.g Citrus clementina Ciclev10002972m.g N
evm.TU.supercontig_2.268 Carica papaya evm.TU.supercontig_2.268 N
F775_06506 Aegilops tauschii F775_06506 N
gene28054-v1.0-hybrid Fragaria vesca gene28054-v1.0-hybrid N
GLYMA02G40400 Glycine max GLYMA02G40400 N
MLOC_14005 Hordeum vulgare MLOC_14005 N
MTR_2g102450 Medicago truncatula MTR_2g102450 N
orange1.1g039664m.g Citrus sinensis orange1.1g039664m.g N
PDK_20s1595621g002 Phoenix dactylifera PDK_20s1595621g002 N
PGSC0003DMG400020648 Solanum tuberosum PGSC0003DMG400020648 N
PK16911.1 Cannabis sativa PK16911.1 N
Pm000222 Prunus mume Pm000222 N
Solyc06g007530.2 Solanum lycopersicum Solyc06g007530.2 N
Traes_1AL_C340A8E74 Triticum aestivum Traes_1AL_C340A8E74 N
Traes_1BL_A8FC9D468 Triticum aestivum Traes_1BL_A8FC9D468 N
Traes_1DL_1806CFE5F Triticum aestivum Traes_1DL_1806CFE5F N
Traes_1DL_1806CFE5F1 Triticum aestivum Traes_1DL_1806CFE5F1 N
TRIUR3_13028 Triticum urartu TRIUR3_13028 N