PGSC0003DMG400010197 (Solanum tuberosum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 PGSC0003DMG400010197 T249621_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05550
M06978_2.00 		Arabidopsis thaliana
HNDYCGCCGGMRWND
HNWYKCCGGCGRHND		 Dap-seq
OMalley et al.(2016)
AT5G05550_col_a 		0.838 0.611
AT5G05550
M06979_2.00 		Arabidopsis thaliana
HYNYCGCCGGARWHD
HDWYTCCGGCGRNRD		 Dap-seq
OMalley et al.(2016)
AT5G05550_colamp_a 		0.838 0.611
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.836 0.625
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.836 0.625
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400026431 MADF 36 116
PGSC0003DMT400026432 MADF 36 116

Links

Other MADF family TFs
Other Solanum tuberosum TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB05479 Xenopus laevis AAB05479 I 0.000
AAEL006419 Aedes aegypti AAEL006419 I 0.000
AALB007981 Anopheles albimanus AALB007981 I 0.000
Aan_R011115 Calypte anna Aan_R011115 I 0.000
AARA009493 Anopheles arabiensis AARA009493 I 0.000
AATE009298 Anopheles atroparvus AATE009298 I 0.000
ACEP17167 Atta cephalotes ACEP17167 I 0.000
ACOM040639 Anopheles coluzzii ACOM040639 I 0.000
ACUA014515 Anopheles culicifacies ACUA014515 I 0.000
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.000
ACYPI009607 Acyrthosiphon pisum ACYPI009607 I 0.000
ADAC001896 Anopheles darlingi ADAC001896 I 0.000
ADIR011431 Anopheles dirus ADIR011431 I 0.000
AEPI005106 Anopheles epiroticus AEPI005106 I 0.000
AFAF012186 Anopheles farauti AFAF012186 I 0.000
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.000
AFUN007280 Anopheles funestus AFUN007280 I 0.000
AGAP008935 Anopheles gambiae AGAP008935 I 0.000
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.000
AMAM009373 Anopheles maculatus AMAM009373 I 0.000
AMEC017285 Anopheles melas AMEC017285 I 0.000
AMEM004324 Anopheles merus AMEM004324 I 0.000
AMIN005880 Anopheles minimus AMIN005880 I 0.000
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.000
ASIS021327 Anopheles sinensis ASIS021327 I 0.000
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.000
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.000
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.000
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.000
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.000
CapteG179039 Capitella teleta CapteG179039 I 0.000
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.000
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.000
CLEC005205 Cimex lectularius CLEC005205 I 0.000
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.000
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.000
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.000
D915_08967 Fasciola hepatica D915_08967 I 0.000
D915_08968 Fasciola hepatica D915_08968 I 0.000
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.000
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.000
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.000
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.000
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.000
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.000
RBPJ Bos taurus ENSBTAG00000003602 I 0.000
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.000
RBPJ Canis familiaris ENSCAFG00000016387 I 0.000
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.000
su(h) Ciona intestinalis ENSCING00000000838 I 0.000
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.000
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.000
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.000
rbpja Danio rerio ENSDARG00000003398 I 0.000
rbpjb Danio rerio ENSDARG00000052091 I 0.000
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.000
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.000
RBPJ Equus caballus ENSECAG00000019257 I 0.000
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.000
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.000
RBPJ Felis catus ENSFCAG00000030363 I 0.000
RBPJ Homo sapiens ENSG00000168214 D 0.000
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.000
RBPJ Gallus gallus ENSGALG00000014365 I 0.000
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.000
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.000
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.000
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.000
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.000
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.000
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.000
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.000
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.000
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.000
Rbpj Mus musculus ENSMUSG00000039191 D 0.000
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.000
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.000
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.000
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.000
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.000
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.000
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.000
rbpja Oryzias latipes ENSORLG00000004882 I 0.000
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.000
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.000
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.000
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.000
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.000
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.000
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.000
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.000
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.000
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.000
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.000
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.000
RBPJ Sorex araneus ENSSARG00000001169 I 0.000
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.000
RBPJ Sus scrofa ENSSSCG00000022155 I 0.000
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.000
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.000
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.000
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.000
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.000
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.000
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.000
RBPJ Vicugna pacos ENSVPAG00000003620 I 0.000
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.000
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.000
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.000
Su(H) Drosophila melanogaster FBgn0004837 D 0.000
Su(H) Drosophila simulans FBgn0027417 I 0.000
GF14905 Drosophila ananassae FBgn0091930 I 0.000
GG25142 Drosophila erecta FBgn0117267 I 0.000
GH10915 Drosophila grimshawi FBgn0118396 I 0.000
GI13259 Drosophila mojavensis FBgn0136016 I 0.000
GL26026 Drosophila persimilis FBgn0163608 I 0.000
GM15894 Drosophila sechellia FBgn0170810 I 0.000
GJ11880 Drosophila virilis FBgn0199134 I 0.000
GE20814 Drosophila yakuba FBgn0238107 I 0.000
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.000
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.000
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.000
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.000
GB45655 Apis mellifera GB45655 I 0.000
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.000
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.000
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.000
HMEL017244 Heliconius melpomene HMEL017244 I 0.000
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.000
ISCW010197 Ixodes scapularis ISCW010197 I 0.000
KGM_08407 Danaus plexippus KGM_08407 I 0.000
L798_15068 Zootermopsis nevadensis L798_15068 I 0.000
LCUP003485 Lucilia cuprina LCUP003485 I 0.000
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.000
LLOJ000758 Lutzomyia longipalpis LLOJ000758 I 0.000
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.000
LotgiG159505 Lottia gigantea LotgiG159505 I 0.000
MDOA002342 Musca domestica MDOA002342 I 0.000
MESCA005881 Megaselia scalaris MESCA005881 I 0.000
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.000
NECAME_17145 Necator americanus NECAME_17145 I 0.000
NV17858 Nasonia vitripennis NV17858 I 0.000
NV17967 Nasonia vitripennis NV17967 I 0.000
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.000
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.000
PHUM462870 Pediculus humanus PHUM462870 I 0.000
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.000
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.000
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.000
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.000
SINV15808 Solenopsis invicta SINV15808 I 0.000
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.000
SMAR001432 Strigamia maritima SMAR001432 I 0.000
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.000
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.000
SMUV_0001013801 Syphacia muris SMUV_0001013801 I 0.000
Tal_R001466 Tyto alba Tal_R001466 I 0.000
TC014468 Tribolium castaneum TC014468 I 0.000
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.000
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.000
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.000
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.000
rbpj Xenopus tropicalis XB-GENE-490756 I 0.000
rbpj.S Xenopus laevis XB-GENE-865998 I 0.000
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.000