MDP0000415733 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000415733 T250775_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.915 0.606
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.915 0.606
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.915 0.606
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.884 0.563
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000415733 MADF 112 198

Links

Other MADF family TFs
Other Malus domestica TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28077.m000081 Ricinus communis 28077.m000081 I 0.941
29815.m000504 Ricinus communis 29815.m000504 I 0.903
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I 0.831
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.882
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.930
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.915
BGIOSGA016339 Oryza indica BGIOSGA016339 I 0.868
Bo5g137800 Brassica oleracea Bo5g137800 I 0.899
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.915
Bra029812 Brassica rapa Bra029812 I 0.899
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I 0.867
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.903
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.903
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.903
Ca_20148 Cicer arietinum Ca_20148 I 0.918
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.903
Cla018015 Citrullus lanatus Cla018015 I 0.903
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.903
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.918
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.917
F775_31501 Aegilops tauschii F775_31501 I 0.883
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.915
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.854
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.918
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.961
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.918
GLYMA20G33031 Glycine max GLYMA20G33031 I 0.914
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.893
GRMZM2G002978 Zea mays GRMZM2G002978 I 0.868
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.922
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.913
LPERR04G08300 Leersia perrieri LPERR04G08300 I 0.868
MDP0000201016 Malus domestica MDP0000201016 I 0.971
MDP0000399495 Malus domestica MDP0000399495 I 0.971
mgf008067m Mimulus guttatus mgf008067m I 0.876
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.903
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.922
OB04G18670 Oryza brachyantha OB04G18670 I 0.881
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I 0.868
OMERI04G10080 Oryza meridionalis OMERI04G10080 I 0.868
ONIVA04G09510 Oryza nivara ONIVA04G09510 I 0.868
OPUNC04G09570 Oryza punctata OPUNC04G09570 I 0.868
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I 0.868
Pavir.J13370 Panicum virgatum Pavir.J13370 I 0.859
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.921
PK04914.1 Cannabis sativa PK04914.1 D 0.884
Pm026265 Prunus mume Pm026265 I 0.895
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.873
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.940
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.937
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.895
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.964
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I 0.873
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.937
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.937
Sb06g015280 Sorghum bicolor Sb06g015280 I 0.867
SELMODRAFT_130409 Selaginella moellendorffii SELMODRAFT_130409 I 0.833
SELMODRAFT_134056 Selaginella moellendorffii SELMODRAFT_134056 I 0.833
Si009787m.g Setaria italica Si009787m.g I 0.868
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.921
TCM_022397 Theobroma cacao TCM_022397 I 0.874
TCM_043551 Theobroma cacao TCM_043551 I 0.951
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.903
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I 0.883
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I 0.883
TRIUR3_22240 Triticum urartu TRIUR3_22240 I 0.883
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.918
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.953