CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_3g466980
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_3g466980
T254766_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH34469
MADS box
10
55
YITSDAKRKGTFKKRKNGLIKKIDEISTLCGIEACAIIFDQNDPQP
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_08942
Cicer arietinum
Ca_08942
N
0.778
Cla009163
Citrullus lanatus
Cla009163
I
0.711
evm.TU.contig_38146
Carica papaya
evm.TU.contig_38146
I
0.727
evm.TU.contig_43368
Carica papaya
evm.TU.contig_43368
I
0.727
LjSGA_104570.1
Lotus japonicus
LjSGA_104570.1
I
0.724
POPTR_0013s01880
Populus trichocarpa
POPTR_0013s01880
I
0.711
SapurV1A.0066s0310
Salix purpurea
SapurV1A.0066s0310
I
0.711
TCM_026842
Theobroma cacao
TCM_026842
I
0.711