Solyc06g068140.2 (Solanum lycopersicum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Solyc06g068140.2 T261103_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g068140.2.1 MBD 12 84

Links

Other MBD family TFs
Other Solanum lycopersicum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.740
MBD10 Arabidopsis thaliana AT1G15340 N 0.712
MBD11 Arabidopsis thaliana AT3G15790 N 0.726
Bo8g066360 Brassica oleracea Bo8g066360 N 0.726
Bra016665 Brassica rapa Bra016665 N 0.726
Bra027207 Brassica rapa Bra027207 N 0.726
Ca_19192 Cicer arietinum Ca_19192 N 0.716
Cla012920 Citrullus lanatus Cla012920 N 0.757
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.730
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.833
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.712
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.740
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.726
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.712
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.726
MDP0000462461 Malus domestica MDP0000462461 N 0.724
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.932
PK24888.1 Cannabis sativa PK24888.1 N 0.716
Pm013666 Prunus mume Pm013666 N 0.746
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.703
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.726
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.712
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.764