Bo2g144970 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo2g144970 T267181_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.823 0.903
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.823 0.903
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g144970.1 Myb 241 287
Bo2g144970.1 Myb 293 338

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29794.m003447 Ricinus communis 29794.m003447 I
AMEC012340 Anopheles melas AMEC012340 N
PC-MYB1 Arabidopsis thaliana AT4G32730 D
Bo1g010040 Brassica oleracea Bo1g010040 I
Bo3g171130 Brassica oleracea Bo3g171130 I
Bo7g115810 Brassica oleracea Bo7g115810 I
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I
Bra006102 Brassica rapa Bra006102 I
Bra011376 Brassica rapa Bra011376 I
Bra034531 Brassica rapa Bra034531 I
Ca_01884 Cicer arietinum Ca_01884 I
Ca_14925 Cicer arietinum Ca_14925 I
Ca_21127 Cicer arietinum Ca_21127 I
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I
Cla022565 Citrullus lanatus Cla022565 I
Cla023357 Citrullus lanatus Cla023357 I
Cucsa.161430 Cucumis sativus Cucsa.161430 I
Cucsa.311420 Cucumis sativus Cucsa.311420 I
MYBL1 Bos taurus ENSBTAG00000011981 I
MYBL1 Choloepus hoffmanni ENSCHOG00000012311 I
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I
F775_05724 Aegilops tauschii F775_05724 I
F775_10106 Aegilops tauschii F775_10106 I
F775_12121 Aegilops tauschii F775_12121 N
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I
GLYMA04G08550 Glycine max GLYMA04G08550 I
GLYMA06G08660 Glycine max GLYMA06G08660 I
GLYMA14G21523 Glycine max GLYMA14G21523 I
GLYMA17G26240 Glycine max GLYMA17G26240 I
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I
GSMUA_Achr10G14840_001 Musa acuminata GSMUA_Achr10G14840_001 I
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I
Lus10022136.g Linum usitatissimum Lus10022136.g I
MDP0000179225 Malus domestica MDP0000179225 I
MDP0000295807 Malus domestica MDP0000295807 I
mgf002244m Mimulus guttatus mgf002244m N
mgf006384m Mimulus guttatus mgf006384m I
mgf008601m Mimulus guttatus mgf008601m I
MLOC_50701 Hordeum vulgare MLOC_50701 N
MTR_1g026870 Medicago truncatula MTR_1g026870 I
MTR_3g110028 Medicago truncatula MTR_3g110028 I
MYB_AVIMB Avian myeloblastosis virus MYB_AVIMB D
OPUNC01G35700 Oryza punctata OPUNC01G35700 N
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I
PDK_20s1314361g001 Phoenix dactylifera PDK_20s1314361g001 N
Pm005124 Prunus mume Pm005124 I
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I
SELMODRAFT_75978 Selaginella moellendorffii SELMODRAFT_75978 I
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I
TCM_047091 Theobroma cacao TCM_047091 I
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I
TRIUR3_33469 Triticum urartu TRIUR3_33469 N
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I