Bo4g176030 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo4g176030 T267338_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.816 0.860
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.816 0.860
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.754 0.839
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.754 0.839
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.754 0.839
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.754 0.839
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.723 0.753
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.723 0.753
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.694 0.742
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.694 0.742
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.689 0.699
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.689 0.699
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.667 0.720
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.661 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g176030.1 Myb 5 52
Bo4g176030.1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

563 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC205562.3_FG002 Zea mays AC205562.3_FG002 I
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I
WRKY62 Arabidopsis thaliana AT5G01900 D
WRKY38 Arabidopsis thaliana AT5G22570 D
BGIOSGA004703 Oryza indica BGIOSGA004703 I
BGIOSGA012523 Oryza indica BGIOSGA012523 N
BGIOSGA012525 Oryza indica BGIOSGA012525 N
BGIOSGA017556 Oryza indica BGIOSGA017556 I
BGIOSGA017860 Oryza indica BGIOSGA017860 I
BGIOSGA023706 Oryza indica BGIOSGA023706 I
BGIOSGA030346 Oryza indica BGIOSGA030346 I
BGIOSGA030535 Oryza indica BGIOSGA030535 I
BGIOSGA036756 Oryza indica BGIOSGA036756 N
Bo4g012750 Brassica oleracea Bo4g012750 I
Bo5g068250 Brassica oleracea Bo5g068250 I
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I
Bra023211 Brassica rapa Bra023211 I
Bra028918 Brassica rapa Bra028918 I
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I
BRADI2G44270 Brachypodium distachyon BRADI2G44270 I
BRADI2G53495 Brachypodium distachyon BRADI2G53495 I
BRADI3G34850 Brachypodium distachyon BRADI3G34850 I
BRADI4G28280 Brachypodium distachyon BRADI4G28280 I
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I
BRADI4G44360 Brachypodium distachyon BRADI4G44360 I
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I
Carubv10012720m.g Capsella rubella Carubv10012720m.g I
Carubv10021420m.g Capsella rubella Carubv10021420m.g I
Carubv10022162m.g Capsella rubella Carubv10022162m.g I
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I
F775_00757 Aegilops tauschii F775_00757 I
F775_02479 Aegilops tauschii F775_02479 N
F775_02480 Aegilops tauschii F775_02480 N
F775_04232 Aegilops tauschii F775_04232 N
F775_07376 Aegilops tauschii F775_07376 I
F775_07845 Aegilops tauschii F775_07845 I
F775_21933 Aegilops tauschii F775_21933 I
F775_22808 Aegilops tauschii F775_22808 I
F775_23182 Aegilops tauschii F775_23182 I
F775_24185 Aegilops tauschii F775_24185 I
F775_25840 Aegilops tauschii F775_25840 I
F775_27484 Aegilops tauschii F775_27484 I
F775_30853 Aegilops tauschii F775_30853 I
GRMZM2G004060 Zea mays GRMZM2G004060 I
GRMZM2G029292 Zea mays GRMZM2G029292 I
GRMZM2G030272 Zea mays GRMZM2G030272 N
GRMZM2G063216 Zea mays GRMZM2G063216 N
GRMZM2G065290 Zea mays GRMZM2G065290 I
GRMZM2G163418 Zea mays GRMZM2G163418 I
GRMZM2G169564 Zea mays GRMZM2G169564 N
GRMZM2G324999 Zea mays GRMZM2G324999 I
GRMZM2G382350 Zea mays GRMZM2G382350 I
GRMZM2G400559 Zea mays GRMZM2G400559 N
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I
LPERR03G13630 Leersia perrieri LPERR03G13630 N
LPERR05G06630 Leersia perrieri LPERR05G06630 I
LPERR05G16150 Leersia perrieri LPERR05G16150 I
LPERR05G16170 Leersia perrieri LPERR05G16170 I
LPERR07G23280 Leersia perrieri LPERR07G23280 I
LPERR10G04210 Leersia perrieri LPERR10G04210 I
LPERR11G00960 Leersia perrieri LPERR11G00960 I
LPERR11G00970 Leersia perrieri LPERR11G00970 N
LPERR12G01080 Leersia perrieri LPERR12G01080 N
MDP0000146360 Malus domestica MDP0000146360 I
MDP0000299114 Malus domestica MDP0000299114 I
MDP0000315045 Malus domestica MDP0000315045 I
MDP0000754989 Malus domestica MDP0000754989 I
MLOC_45055 Hordeum vulgare MLOC_45055 I
MLOC_52504 Hordeum vulgare MLOC_52504 I
MLOC_5971 Hordeum vulgare MLOC_5971 I
MLOC_7000 Hordeum vulgare MLOC_7000 I
MLOC_71897 Hordeum vulgare MLOC_71897 I
OB01G44140 Oryza brachyantha OB01G44140 I
OB03G25300 Oryza brachyantha OB03G25300 N
OB03G26140 Oryza brachyantha OB03G26140 I
OB05G17240 Oryza brachyantha OB05G17240 I
OB05G27830 Oryza brachyantha OB05G27830 I
OB05G27850 Oryza brachyantha OB05G27850 I
OB07G31890 Oryza brachyantha OB07G31890 I
OB11G10740 Oryza brachyantha OB11G10740 N
OB11G10760 Oryza brachyantha OB11G10760 N
OB12G11030 Oryza brachyantha OB12G11030 N
OBART01G35310 Oryza barthii OBART01G35310 I
OBART03G15470 Oryza barthii OBART03G15470 N
OBART05G08130 Oryza barthii OBART05G08130 I
OBART05G20330 Oryza barthii OBART05G20330 I
OBART05G20340 Oryza barthii OBART05G20340 I
OBART07G26430 Oryza barthii OBART07G26430 I
OBART09G06020 Oryza barthii OBART09G06020 I
OBART11G01110 Oryza barthii OBART11G01110 I
OBART12G00850 Oryza barthii OBART12G00850 N
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I
OGLUM07G26470 Oryza glumaepatula OGLUM07G26470 I
OGLUM09G06630 Oryza glumaepatula OGLUM09G06630 I
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I
OGLUM12G01420 Oryza glumaepatula OGLUM12G01420 N
OLONG_001744 Oryza longistaminata OLONG_001744 N
OLONG_008209 Oryza longistaminata OLONG_008209 I
OLONG_019907 Oryza longistaminata OLONG_019907 I
OLONG_022888 Oryza longistaminata OLONG_022888 N
OLONG_027124 Oryza longistaminata OLONG_027124 I
OMERI05G18170 Oryza meridionalis OMERI05G18170 I
OMERI05G18250 Oryza meridionalis OMERI05G18250 I
OMERI05G18260 Oryza meridionalis OMERI05G18260 I
OMERI07G23060 Oryza meridionalis OMERI07G23060 I
OMERI09G04750 Oryza meridionalis OMERI09G04750 I
OMERI11G01570 Oryza meridionalis OMERI11G01570 N
ONIVA01G40340 Oryza nivara ONIVA01G40340 I
ONIVA03G16490 Oryza nivara ONIVA03G16490 N
ONIVA05G08650 Oryza nivara ONIVA05G08650 I
ONIVA05G21440 Oryza nivara ONIVA05G21440 I
ONIVA05G21460 Oryza nivara ONIVA05G21460 I
ONIVA07G26140 Oryza nivara ONIVA07G26140 I
ONIVA09G05410 Oryza nivara ONIVA09G05410 I
ONIVA11G01070 Oryza nivara ONIVA11G01070 N
ONIVA11G01240 Oryza nivara ONIVA11G01240 I
OPUNC03G15030 Oryza punctata OPUNC03G15030 N
OPUNC05G07410 Oryza punctata OPUNC05G07410 I
OPUNC05G17980 Oryza punctata OPUNC05G17980 I
OPUNC05G18000 Oryza punctata OPUNC05G18000 I
OPUNC05G18030 Oryza punctata OPUNC05G18030 I
OPUNC07G24890 Oryza punctata OPUNC07G24890 I
OPUNC09G05480 Oryza punctata OPUNC09G05480 I
OPUNC11G00980 Oryza punctata OPUNC11G00980 N
OPUNC12G00990 Oryza punctata OPUNC12G00990 N
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I
ORGLA07G0207800 Oryza glaberrima ORGLA07G0207800 I
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I
ORUFI07G27440 Oryza rufipogon ORUFI07G27440 I
ORUFI09G06720 Oryza rufipogon ORUFI09G06720 I
ORUFI11G01050 Oryza rufipogon ORUFI11G01050 N
ORUFI12G01180 Oryza rufipogon ORUFI12G01180 N
OS01G0820700 Oryza sativa OS01G0820700 I
OS03G0321700 Oryza sativa OS03G0321700 N
OS05G0478400 Oryza sativa OS05G0478400 I
OS05G0478800 Oryza sativa OS05G0478800 I
OS07G0680400 Oryza sativa OS07G0680400 I
OS09G0334500 Oryza sativa OS09G0334500 I
OS11G0117500 Oryza sativa OS11G0117500 N
OS12G0116700 Oryza sativa OS12G0116700 N
Pavir.Ba00227 Panicum virgatum Pavir.Ba00227 I
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I
Pavir.Ca00084 Panicum virgatum Pavir.Ca00084 N
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I
Pavir.Ea03258 Panicum virgatum Pavir.Ea03258 I
Pavir.Eb03563 Panicum virgatum Pavir.Eb03563 I
Pavir.Ga01476 Panicum virgatum Pavir.Ga01476 N
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I
Pavir.J05812 Panicum virgatum Pavir.J05812 I
Pavir.J09582 Panicum virgatum Pavir.J09582 N
Pavir.J34713 Panicum virgatum Pavir.J34713 N
Pavir.J35902 Panicum virgatum Pavir.J35902 I
Pavir.J39511 Panicum virgatum Pavir.J39511 I
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I
Pm003014 Prunus mume Pm003014 I
Pm024064 Prunus mume Pm024064 I
PRUPE_ppa008573mg Prunus persica PRUPE_ppa008573mg I
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I
Sb01g036870 Sorghum bicolor Sb01g036870 N
Sb02g022290 Sorghum bicolor Sb02g022290 I
Sb02g043030 Sorghum bicolor Sb02g043030 I
Sb03g038170 Sorghum bicolor Sb03g038170 I
Sb03g038180 Sorghum bicolor Sb03g038180 I
Sb05g001200 Sorghum bicolor Sb05g001200 N
Sb05g001220 Sorghum bicolor Sb05g001220 N
Sb07g019400 Sorghum bicolor Sb07g019400 I
Sb08g002560 Sorghum bicolor Sb08g002560 N
Sb08g005080 Sorghum bicolor Sb08g005080 I
WRKY38 Arabidopsis lyrata scaffold_602308.1 I
Si002401m.g Setaria italica Si002401m.g I
Si010764m.g Setaria italica Si010764m.g N
Si019098m.g Setaria italica Si019098m.g N
Si025181m.g Setaria italica Si025181m.g I
Si027574m.g Setaria italica Si027574m.g I
Si027876m.g Setaria italica Si027876m.g N
Si028202m.g Setaria italica Si028202m.g I
Si030395m.g Setaria italica Si030395m.g I
Si036565m.g Setaria italica Si036565m.g I
Si039519m.g Setaria italica Si039519m.g N
TCM_006103 Theobroma cacao TCM_006103 I
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I
Traes_3AL_2297D6E18 Triticum aestivum Traes_3AL_2297D6E18 I
Traes_3DL_48F7A19D2 Triticum aestivum Traes_3DL_48F7A19D2 I
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I
Traes_5AL_69A969FF4 Triticum aestivum Traes_5AL_69A969FF4 N
Traes_5BL_0A3D332A8 Triticum aestivum Traes_5BL_0A3D332A8 I
Traes_5BL_F853EA802 Triticum aestivum Traes_5BL_F853EA802 I
Traes_5DL_5C93510D5 Triticum aestivum Traes_5DL_5C93510D5 I
Traes_5DL_C93641E43 Triticum aestivum Traes_5DL_C93641E43 I
TRIUR3_01445 Triticum urartu TRIUR3_01445 N
TRIUR3_01447 Triticum urartu TRIUR3_01447 N
TRIUR3_03056 Triticum urartu TRIUR3_03056 N
TRIUR3_05298 Triticum urartu TRIUR3_05298 I
TRIUR3_14306 Triticum urartu TRIUR3_14306 I
TRIUR3_20905 Triticum urartu TRIUR3_20905 N
TRIUR3_22128 Triticum urartu TRIUR3_22128 I
TRIUR3_26571 Triticum urartu TRIUR3_26571 N
TRIUR3_30416 Triticum urartu TRIUR3_30416 I