GSMUA_Achr1G16440_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr1G16440_001 T272322_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G24120
M00729_2.00 		Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN		 PBM
Chang et al.(2013)
pTH7086 		0.827 0.872
UNE16
M01270_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Lambert et al.(2019)
pTH9967 		0.827 0.872
AT3G24120
M07085_2.00 		Arabidopsis thaliana
HAKATTCB
VGAATMTD		 Dap-seq
OMalley et al.(2016)
At3g24120_col_a 		0.827 0.872
AT3G24120
M07086_2.00 		Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN		 Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a 		0.827 0.872
MYR1
M02309_2.00 		Arabidopsis thaliana
NKATNCBNNN
NNNVGNATMN		 PBM
Weirauch et al.(2014)
pTH8859 		0.762 0.809
MYR2
M02294_2.00 		Arabidopsis thaliana
NKATDCBNN
NNVGHATMN		 PBM
Weirauch et al.(2014)
pTH7097 		0.755 0.787
MYR2
M07063_2.00 		Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN		 Dap-seq
OMalley et al.(2016)
At3g04030_col_a 		0.755 0.787
MYR2
M07064_2.00 		Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB		 Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a 		0.755 0.787
PHL12
M01077_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Sullivan et al.(2014)
pTH7098 		0.749 0.830
PHL12
M07079_2.00 		Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY		 Dap-seq
OMalley et al.(2016)
At3g12730_col_a 		0.749 0.830
PHL12
M07080_2.00 		Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a 		0.749 0.830
PHL11
M07134_2.00 		Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
AT5G45580_col_a 		0.739 0.809
PHL11
M07135_2.00 		Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN		 Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a 		0.739 0.809
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.739 0.809
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.739 0.809
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.739 0.809
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.739 0.809
AT2G20400
M07046_2.00 		Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN		 Dap-seq
OMalley et al.(2016)
AT2G20400_col_a 		0.668 0.702
AT2G20400
M07047_2.00 		Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY		 Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a 		0.668 0.702
Q5IWM2_WHEAT
M11059_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB80_01 		0.666 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P16440_001 Myb 32 83

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

687 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29737.m001227 Ricinus communis 29737.m001227 I
29848.m004559 Ricinus communis 29848.m004559 I
29929.m004752 Ricinus communis 29929.m004752 I
AMTR_s00049p00081480 Amborella trichopoda AMTR_s00049p00081480 I
Aquca_011_00344 Aquilegia coerulea Aquca_011_00344 I
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I
ARR11 Arabidopsis thaliana AT1G67710 D
ARR12 Arabidopsis thaliana AT2G25180 I
BGIOSGA000304 Oryza indica BGIOSGA000304 I
RR23 Oryza indica BGIOSGA005436 I
RR22 Oryza indica BGIOSGA022430 I
Bo4g157430 Brassica oleracea Bo4g157430 I
Bo6g098710 Brassica oleracea Bo6g098710 I
Bo6g105120 Brassica oleracea Bo6g105120 I
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I
Bostr.26959s0139 Boechera stricta Bostr.26959s0139 I
Bra004076 Brassica rapa Bra004076 I
Bra004245 Brassica rapa Bra004245 I
Bra032035 Brassica rapa Bra032035 I
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I
Cagra.2261s0012 Capsella grandiflora Cagra.2261s0012 I
Cagra.2381s0022 Capsella grandiflora Cagra.2381s0022 I
Carubv10020133m.g Capsella rubella Carubv10020133m.g I
Carubv10022837m.g Capsella rubella Carubv10022837m.g I
Carubv10026052m.g Capsella rubella Carubv10026052m.g I
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I
cassava32312.m1 Manihot esculenta cassava32312.m1 I
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I
Ca_11309 Cicer arietinum Ca_11309 I
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I
Cla021325 Citrullus lanatus Cla021325 I
Cla023064 Citrullus lanatus Cla023064 I
Cucsa.271670 Cucumis sativus Cucsa.271670 I
Cucsa.350850 Cucumis sativus Cucsa.350850 I
Cucsa.394720 Cucumis sativus Cucsa.394720 I
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I
Eucgr.H04694 Eucalyptus grandis Eucgr.H04694 I
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I
F775_13501 Aegilops tauschii F775_13501 I
F775_19079 Aegilops tauschii F775_19079 I
F775_27736 Aegilops tauschii F775_27736 I
ARR12 Arabidopsis lyrata fgenesh2_kg.4__435__AT2G25180.1 I
GLYMA04G06650 Glycine max GLYMA04G06650 I
GLYMA05G27670 Glycine max GLYMA05G27670 I
GLYMA06G06730 Glycine max GLYMA06G06730 I
GLYMA08G10650 Glycine max GLYMA08G10650 I
GLYMA09G14650 Glycine max GLYMA09G14650 I
GLYMA11G37480 Glycine max GLYMA11G37480 I
GLYMA14G13320 Glycine max GLYMA14G13320 I
GLYMA15G24770 Glycine max GLYMA15G24770 I
GLYMA18G01434 Glycine max GLYMA18G01434 I
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I
GRMZM2G060485 Zea mays GRMZM2G060485 I
GRMZM2G100318 Zea mays GRMZM2G100318 I
GRMZM2G177220 Zea mays GRMZM2G177220 I
GRMZM2G479110 Zea mays GRMZM2G479110 I
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I
LPERR01G35510 Leersia perrieri LPERR01G35510 I
LPERR06G04900 Leersia perrieri LPERR06G04900 I
Lus10006446.g Linum usitatissimum Lus10006446.g I
Lus10011389.g Linum usitatissimum Lus10011389.g I
Lus10019058.g Linum usitatissimum Lus10019058.g I
Lus10036303.g Linum usitatissimum Lus10036303.g I
MDP0000305167 Malus domestica MDP0000305167 I
MDP0000307383 Malus domestica MDP0000307383 I
MDP0000320381 Malus domestica MDP0000320381 I
mgf000016m Mimulus guttatus mgf000016m I
mgf004388m Mimulus guttatus mgf004388m I
mgf013006m Mimulus guttatus mgf013006m I
MLOC_23250 Hordeum vulgare MLOC_23250 I
MLOC_3955 Hordeum vulgare MLOC_3955 I
MLOC_61880 Hordeum vulgare MLOC_61880 I
MTR_1g013180 Medicago truncatula MTR_1g013180 I
MTR_3g086100 Medicago truncatula MTR_3g086100 I
MTR_8g079940 Medicago truncatula MTR_8g079940 I
OB01G49660 Oryza brachyantha OB01G49660 I
OB02G42700 Oryza brachyantha OB02G42700 I
OB06G14930 Oryza brachyantha OB06G14930 I
OBART01G40940 Oryza barthii OBART01G40940 I
OBART06G05360 Oryza barthii OBART06G05360 I
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I
OLONG_004141 Oryza longistaminata OLONG_004141 I
OMERI01G37950 Oryza meridionalis OMERI01G37950 I
OMERI06G06380 Oryza meridionalis OMERI06G06380 I
ONIVA01G45980 Oryza nivara ONIVA01G45980 I
ONIVA06G06160 Oryza nivara ONIVA06G06160 I
OPUNC01G39740 Oryza punctata OPUNC01G39740 I
OPUNC06G05150 Oryza punctata OPUNC06G05150 I
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I
orange1.1g007940m.g Citrus sinensis orange1.1g007940m.g I
orange1.1g027234m.g Citrus sinensis orange1.1g027234m.g I
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I
RR26 Oryza sativa OS01G0904700 I
RR23 Oryza sativa OS02G0796500 I
RR22 Oryza sativa OS06G0183100 I
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I
Pavir.J08270 Panicum virgatum Pavir.J08270 I
Pavir.J23046 Panicum virgatum Pavir.J23046 I
Pavir.J35630 Panicum virgatum Pavir.J35630 I
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I
PDK_20s1379531g004 Phoenix dactylifera PDK_20s1379531g004 I
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I
PGSC0003DMG400011980 Solanum tuberosum PGSC0003DMG400011980 I
PK07924.1 Cannabis sativa PK07924.1 D
Pm006838 Prunus mume Pm006838 I
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I
Sb03g043080 Sorghum bicolor Sb03g043080 I
Sb04g005580 Sorghum bicolor Sb04g005580 I
Sb04g035980 Sorghum bicolor Sb04g035980 I
Sb10g005580 Sorghum bicolor Sb10g005580 I
ARR11 Arabidopsis lyrata scaffold_201596.1 I
Si000815m.g Setaria italica Si000815m.g I
Si006013m.g Setaria italica Si006013m.g I
Si016546m.g Setaria italica Si016546m.g I
Si016630m.g Setaria italica Si016630m.g I
Solyc05g014260.2 Solanum lycopersicum Solyc05g014260.2 I
TCM_010701 Theobroma cacao TCM_010701 I
TCM_036926 Theobroma cacao TCM_036926 I
TCM_037098 Theobroma cacao TCM_037098 I
Thhalv10000098m.g Eutrema salsugineum Thhalv10000098m.g I
Thhalv10018396m.g Eutrema salsugineum Thhalv10018396m.g I
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I
TRIUR3_26858 Triticum urartu TRIUR3_26858 I
TRIUR3_28229 Triticum urartu TRIUR3_28229 I
TRIUR3_31924 Triticum urartu TRIUR3_31924 I
ARR11 Vitis vinifera VIT_01s0010g02230 I
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I