CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_7DL_090D0E08E
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_7DL_090D0E08E
T281344_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.811
0.872
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.776
0.830
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.776
0.830
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.749
0.830
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS
SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.749
0.830
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.749
0.830
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.749
0.830
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.735
0.766
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.735
0.766
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.733
0.851
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.702
0.809
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.702
0.809
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.692
0.809
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.692
0.809
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.685
0.745
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.665
0.702
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.665
0.702
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.665
0.702
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.665
0.702
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.665
0.702
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB
VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.665
0.702
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.665
0.702
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_7DL_090D0E08E.3
Myb
276
327
RLRWTLELHERFVEAVNKLEGPDKATPKGVLKLMKVEGLTIYHVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
699 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30143.m001171
Ricinus communis
30143.m001171
N
LBD33
Arabidopsis lyrata
Al_scaffold_0006_527
N
LBD33
Arabidopsis thaliana
AT5G06080
N
Bo9g176580
Brassica oleracea
Bo9g176580
N
Bostr.13129s0366
Boechera stricta
Bostr.13129s0366
N
Bra009161
Brassica rapa
Bra009161
N
Cagra.2117s0054
Capsella grandiflora
Cagra.2117s0054
N
Carubv10002921m.g
Capsella rubella
Carubv10002921m.g
N
cassava15468.m1
Manihot esculenta
cassava15468.m1
I
cassava34632.m1
Manihot esculenta
cassava34632.m1
N
Ca_16122
Cicer arietinum
Ca_16122
N
Ciclev10033354m.g
Citrus clementina
Ciclev10033354m.g
I
Cucsa.165150
Cucumis sativus
Cucsa.165150
N
Eucgr.G02955
Eucalyptus grandis
Eucgr.G02955
I
evm.TU.supercontig_1.438
Carica papaya
evm.TU.supercontig_1.438
I
gene26330-v1.0-hybrid
Fragaria vesca
gene26330-v1.0-hybrid
N
GLYMA02G41710
Glycine max
GLYMA02G41710
N
GLYMA14G07260
Glycine max
GLYMA14G07260
N
Gorai.011G267700
Gossypium raimondii
Gorai.011G267700
I
LjSGA_054888.1
Lotus japonicus
LjSGA_054888.1
I
MDP0000123797
Malus domestica
MDP0000123797
N
MDP0000133936
Malus domestica
MDP0000133936
N
MTR_5g080470
Medicago truncatula
MTR_5g080470
N
PK00972.1
Cannabis sativa
PK00972.1
I
Pm018835
Prunus mume
Pm018835
N
POPTR_0002s14990
Populus trichocarpa
POPTR_0002s14990
I
POPTR_0010s20800
Populus trichocarpa
POPTR_0010s20800
I
PRUPE_ppa018815mg
Prunus persica
PRUPE_ppa018815mg
N
SapurV1A.0281s0190
Salix purpurea
SapurV1A.0281s0190
I
TCM_042730
Theobroma cacao
TCM_042730
I
LBD33
Vitis vinifera
VIT_13s0019g02060
N