Traes_7DL_090D0E08E (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_7DL_090D0E08E T281344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.811 0.872
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.776 0.830
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.776 0.830
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.749 0.830
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.749 0.830
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.749 0.830
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.749 0.830
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.735 0.766
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.735 0.766
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.733 0.851
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.702 0.809
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN

NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.702 0.809
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB

VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.692 0.809
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD

HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.692 0.809
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.685 0.745
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.665 0.702
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.665 0.702
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.665 0.702
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.665 0.702
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.665 0.702
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.665 0.702
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.665 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7DL_090D0E08E.3 Myb 276 327

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

699 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30143.m001171 Ricinus communis 30143.m001171 N
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N
LBD33 Arabidopsis thaliana AT5G06080 N
Bo9g176580 Brassica oleracea Bo9g176580 N
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N
Bra009161 Brassica rapa Bra009161 N
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N
Carubv10002921m.g Capsella rubella Carubv10002921m.g N
cassava15468.m1 Manihot esculenta cassava15468.m1 I
cassava34632.m1 Manihot esculenta cassava34632.m1 N
Ca_16122 Cicer arietinum Ca_16122 N
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I
Cucsa.165150 Cucumis sativus Cucsa.165150 N
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N
GLYMA02G41710 Glycine max GLYMA02G41710 N
GLYMA14G07260 Glycine max GLYMA14G07260 N
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I
MDP0000123797 Malus domestica MDP0000123797 N
MDP0000133936 Malus domestica MDP0000133936 N
MTR_5g080470 Medicago truncatula MTR_5g080470 N
PK00972.1 Cannabis sativa PK00972.1 I
Pm018835 Prunus mume Pm018835 N
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I
TCM_042730 Theobroma cacao TCM_042730 I
LBD33 Vitis vinifera VIT_13s0019g02060 N