Carubv10010086m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10010086m.g T286299_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10010086m Myb 14 61
Carubv10010086m Myb 67 112

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27798.m000612 Ricinus communis 27798.m000612 I
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I
MYB1 Arabidopsis thaliana AT3G09230 D
MYB109 Arabidopsis thaliana AT3G55730 I
BGIOSGA000485 Oryza indica BGIOSGA000485 I
Bo1g144680 Brassica oleracea Bo1g144680 I
Bo4g025810 Brassica oleracea Bo4g025810 I
Bo7g117880 Brassica oleracea Bo7g117880 I
Bo8g090160 Brassica oleracea Bo8g090160 I
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I
Bra001323 Brassica rapa Bra001323 I
Bra005006 Brassica rapa Bra005006 I
Bra007186 Brassica rapa Bra007186 I
Bra034057 Brassica rapa Bra034057 I
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I
Cagra.0003s0013 Capsella grandiflora Cagra.0003s0013 I
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I
Carubv10013882m.g Capsella rubella Carubv10013882m.g I
Carubv10017397m.g Capsella rubella Carubv10017397m.g I
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I
cassava8939.m1 Manihot esculenta cassava8939.m1 I
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I
Cla018417 Citrullus lanatus Cla018417 I
Cla021015 Citrullus lanatus Cla021015 I
Cucsa.066910 Cucumis sativus Cucsa.066910 I
Cucsa.244650 Cucumis sativus Cucsa.244650 I
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I
MYB109 Arabidopsis lyrata fgenesh2_kg.5__1999__AT3G55730.1 I
gene18756-v1.0-hybrid Fragaria vesca gene18756-v1.0-hybrid I
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I
GLYMA01G26650 Glycine max GLYMA01G26650 I
GLYMA02G42030 Glycine max GLYMA02G42030 I
GLYMA02G43280 Glycine max GLYMA02G43280 I
GLYMA03G15810 Glycine max GLYMA03G15810 I
GLYMA14G06320 Glycine max GLYMA14G06320 I
GLYMA14G06870 Glycine max GLYMA14G06870 I
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I
GRMZM2G050550 Zea mays GRMZM2G050550 I
GRMZM2G078820 Zea mays GRMZM2G078820 I
GRMZM2G087955 Zea mays GRMZM2G087955 I
GRMZM2G145444 Zea mays GRMZM2G145444 I
GRMZM2G169316 Zea mays GRMZM2G169316 I
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I
LPERR01G32110 Leersia perrieri LPERR01G32110 I
LPERR02G05810 Leersia perrieri LPERR02G05810 I
Lus10028250.g Linum usitatissimum Lus10028250.g I
Lus10040239.g Linum usitatissimum Lus10040239.g I
MDP0000203733 Malus domestica MDP0000203733 I
MDP0000284922 Malus domestica MDP0000284922 I
MDP0000319124 Malus domestica MDP0000319124 I
MDP0000478512 Malus domestica MDP0000478512 I
MDP0000807341 Malus domestica MDP0000807341 I
mgf006151m Mimulus guttatus mgf006151m I
mgf015566m Mimulus guttatus mgf015566m I
mgf018580m Mimulus guttatus mgf018580m I
mgf025567m Mimulus guttatus mgf025567m I
MLOC_10322 Hordeum vulgare MLOC_10322 I
MLOC_7426 Hordeum vulgare MLOC_7426 I
MTR_4g019370 Medicago truncatula MTR_4g019370 I
MTR_5g082910 Medicago truncatula MTR_5g082910 I
MTR_6g015455 Medicago truncatula MTR_6g015455 I
OB01G46120 Oryza brachyantha OB01G46120 I
OBART01G37390 Oryza barthii OBART01G37390 I
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I
OLONG_001357 Oryza longistaminata OLONG_001357 I
OMERI01G34370 Oryza meridionalis OMERI01G34370 I
OMERI02G07700 Oryza meridionalis OMERI02G07700 I
ONIVA01G42300 Oryza nivara ONIVA01G42300 I
ONIVA02G08210 Oryza nivara ONIVA02G08210 I
OPUNC01G36300 Oryza punctata OPUNC01G36300 I
OPUNC02G05820 Oryza punctata OPUNC02G05820 I
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I
OS01G0850400 Oryza sativa OS01G0850400 I
OS02G0187700 Oryza sativa OS02G0187700 D
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I
Pavir.J13677 Panicum virgatum Pavir.J13677 I
Pavir.J23512 Panicum virgatum Pavir.J23512 I
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I
PK07741.1 Cannabis sativa PK07741.1 D
PK12959.1 Cannabis sativa PK12959.1 I
PK16550.1 Cannabis sativa PK16550.1 I
Pm002576 Prunus mume Pm002576 I
Pm018862 Prunus mume Pm018862 I
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I
SapurV1A.0262s0270 Salix purpurea SapurV1A.0262s0270 I
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I
Sb02g013010 Sorghum bicolor Sb02g013010 I
Sb03g039950 Sorghum bicolor Sb03g039950 I
Sb04g005940 Sorghum bicolor Sb04g005940 I
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I
Si001686m.g Setaria italica Si001686m.g I
Si017917m.g Setaria italica Si017917m.g I
Si032789m.g Setaria italica Si032789m.g I
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I
TCM_021796 Theobroma cacao TCM_021796 I
TCM_042629 Theobroma cacao TCM_042629 I
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I
TRIUR3_08319 Triticum urartu TRIUR3_08319 I
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I